Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 BNIP3P5-201ENST00000562290 498 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 MIR5186-201ENST00000577504 120 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC022662.1-201ENST00000580252 331 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC022916.3-201ENST00000592961 742 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 BBIP1P1-201ENST00000602999 279 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AL158163.1-201ENST00000603915 1649 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC106900.2-201ENST00000604994 317 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC012443.1-201ENST00000605605 231 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC027449.1-201ENST00000608890 407 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC090912.3-201ENST00000609775 533 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 VIS1.1-201ENST00000610517 203 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 TUG1_1.1-201ENST00000610654 145 ntBASIC3.57□□□□□ -1.84
SCN1BQ07699 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
SCN1BQ07699 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.57□□□□□ -1.84
SCN1BQ07699 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AC012618.3-205ENST00000637896 1496 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SCN1BQ07699 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 RNA5SP447-201ENST00000363749 119 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 RNU6-343P-201ENST00000364709 104 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 RNU11-4P-201ENST00000391149 133 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 RPS15AP38-201ENST00000413110 372 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AL590139.1-201ENST00000416267 400 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 UBE2D3P2-201ENST00000424409 445 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AC017083.1-201ENST00000428093 483 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 RPS3AP54-201ENST00000435535 734 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 SETP5-201ENST00000437270 562 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 COX7BP2-201ENST00000437976 242 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 RPL36AP13-201ENST00000457490 317 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 FAM172BP-201ENST00000487497 1089 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AF213884.1-201ENST00000488102 463 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AC010587.2-201ENST00000511727 448 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AL391156.1-201ENST00000554965 554 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AC090615.1-201ENST00000577519 154 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AL592295.2-201ENST00000612578 206 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL591424.2-201ENST00000617023 128 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN1BQ07699 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 AL078595.3-201ENST00000623815 1166 ntBASIC3.56□□□□□ -1.84
SCN1BQ07699 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.56□□□□□ -1.84
SCN1BQ07699 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SCN1BQ07699 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SCN1BQ07699 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.56□□□□□ -1.84
SCN1BQ07699 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCN1BQ07699 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCN1BQ07699 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AL021368.2-201ENST00000606125 5352 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC005539.1-201ENST00000443768 1479 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
SCN1BQ07699 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 FRG1BP-201ENST00000278882 761 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
SCN1BQ07699 RN7SKP235-201ENST00000410662 305 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC011933.1-201ENST00000413334 321 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC109780.2-201ENST00000413467 845 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 ELOCP9-201ENST00000418624 239 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 BEND7P1-201ENST00000422058 457 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AL157831.1-201ENST00000426134 473 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC084290.1-201ENST00000434995 374 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 MTCO2P20-201ENST00000437339 673 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 RPL23AP46-201ENST00000438548 490 ntBASIC3.55□□□□□ -1.84
SCN1BQ07699 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.55□□□□□ -1.84
SCN1BQ07699 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.55□□□□□ -1.84
SCN1BQ07699 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SCN1BQ07699 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms