Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.68□□□□□ -1.98
H3F3AP84243 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.68□□□□□ -1.98
H3F3AP84243 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
H3F3AP84243 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
H3F3AP84243 AP002907.1-201ENST00000606361 1430 ntBASIC2.68□□□□□ -1.98
H3F3AP84243 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.68□□□□□ -1.98
H3F3AP84243 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
H3F3AP84243 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
H3F3AP84243 AC116096.1-201ENST00000566804 2314 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.67□□□□□ -1.98
H3F3AP84243 U8.9-201ENST00000365667 134 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 MIR1250-201ENST00000408098 113 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.67□□□□□ -1.98
H3F3AP84243 RPL7P8-201ENST00000411964 730 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 MTCO3P4-201ENST00000419236 787 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 SETP8-201ENST00000435341 628 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 RPS3AP12-201ENST00000443616 753 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.67□□□□□ -1.98
H3F3AP84243 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.67□□□□□ -1.98
H3F3AP84243 HMGB1P5-202ENST00000451497 985 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 HMGB1P15-201ENST00000453854 435 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.67□□□□□ -1.98
H3F3AP84243 S100A11P2-201ENST00000467589 312 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 SYPL1P1-201ENST00000473622 768 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 PRELID3BP6-201ENST00000503839 571 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 AC016065.2-201ENST00000514530 444 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 SNORD59.2-201ENST00000516873 68 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.67□□□□□ -1.98
H3F3AP84243 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.67□□□□□ -1.98
H3F3AP84243 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.67□□□□□ -1.98
H3F3AP84243 AC090751.1-201ENST00000566966 267 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.67□□□□□ -1.98
H3F3AP84243 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.67□□□□□ -1.98
H3F3AP84243 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.67□□□□□ -1.98
H3F3AP84243 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.67□□□□□ -1.98
H3F3AP84243 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H3F3AP84243 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
H3F3AP84243 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.67□□□□□ -1.98
H3F3AP84243 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
H3F3AP84243 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H3F3AP84243 AC002546.1-201ENST00000588041 2504 ntBASIC2.67□□□□□ -1.98
H3F3AP84243 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
H3F3AP84243 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.66□□□□□ -1.98
H3F3AP84243 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.66□□□□□ -1.98
H3F3AP84243 ZNF37BP-203ENST00000452306 1352 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 METTL21EP-201ENST00000298105 713 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 Y_RNA.333-201ENST00000365274 102 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AL138885.1-201ENST00000405921 675 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 RPL5P18-201ENST00000406671 891 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AL591034.1-201ENST00000407447 340 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.66□□□□□ -1.98
H3F3AP84243 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.66□□□□□ -1.98
H3F3AP84243 Z99127.2-201ENST00000441426 334 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 RPS17P11-201ENST00000474297 293 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 RN7SL633P-201ENST00000488974 297 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 ARL4AP2-201ENST00000507378 601 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
H3F3AP84243 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.66□□□□□ -1.98
H3F3AP84243 RN7SKP272-201ENST00000516988 232 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 SNORA70.24-201ENST00000517233 118 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.66□□□□□ -1.98
H3F3AP84243 COX6B1P6-201ENST00000522347 255 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.66□□□□□ -1.98
H3F3AP84243 AC004923.2-201ENST00000529649 369 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.66□□□□□ -1.98
H3F3AP84243 AL121603.1-201ENST00000553815 142 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 H3F3AP1-201ENST00000559984 334 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
H3F3AP84243 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.66□□□□□ -1.98
H3F3AP84243 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.66□□□□□ -1.98
H3F3AP84243 BNIP3P22-201ENST00000593399 556 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 OR2BH1P-201ENST00000608850 864 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
H3F3AP84243 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.66□□□□□ -1.98
H3F3AP84243 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
H3F3AP84243 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.66□□□□□ -1.98
H3F3AP84243 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
H3F3AP84243 AC011978.2-201ENST00000569835 2054 ntBASIC2.65□□□□□ -1.98
H3F3AP84243 MAPK10-266ENST00000641066 6555 ntBASIC2.65□□□□□ -1.98
H3F3AP84243 PABPC1P7-201ENST00000413177 1513 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
H3F3AP84243 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.65□□□□□ -1.99
H3F3AP84243 AL121972.1-201ENST00000402023 252 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 AL024507.1-201ENST00000412741 274 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.65□□□□□ -1.99
H3F3AP84243 AL606490.7-201ENST00000433136 191 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 RPS7P2-201ENST00000435134 607 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.65□□□□□ -1.99
H3F3AP84243 RPL36AP33-201ENST00000450395 310 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 AC010285.1-201ENST00000470580 392 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 HMGB1P22-201ENST00000505315 124 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 PCNAP1-201ENST00000505363 709 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.65□□□□□ -1.99
H3F3AP84243 RPL7L1P13-201ENST00000511702 739 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 SNORA31.26-201ENST00000517250 137 ntBASIC2.65□□□□□ -1.99
H3F3AP84243 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.65□□□□□ -1.99
H3F3AP84243 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms