Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AC004925.1-201ENST00000624256 2706 ntBASIC3.4□□□□□ -1.86
CBX1P83916 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CBX1P83916 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CBX1P83916 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CBX1P83916 SNORA62-201ENST00000365493 153 ntBASIC3.4□□□□□ -1.87
CBX1P83916 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CBX1P83916 RNU6-730P-201ENST00000383954 104 ntBASIC3.4□□□□□ -1.87
CBX1P83916 RNU6-207P-201ENST00000384137 107 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AL807761.1-201ENST00000417622 171 ntBASIC3.4□□□□□ -1.87
CBX1P83916 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CBX1P83916 AL592293.2-201ENST00000422292 996 ntBASIC3.4□□□□□ -1.87
CBX1P83916 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 GOT2P5-201ENST00000433995 546 ntBASIC3.4□□□□□ -1.87
CBX1P83916 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 MUPP-201ENST00000438111 566 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AC000041.1-201ENST00000439655 175 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.4□□□□□ -1.87
CBX1P83916 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.4□□□□□ -1.87
CBX1P83916 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.4□□□□□ -1.87
CBX1P83916 RPL21P41-201ENST00000459863 264 ntBASIC3.4□□□□□ -1.87
CBX1P83916 RPL9P33-201ENST00000484311 566 ntBASIC3.4□□□□□ -1.87
CBX1P83916 RPS4XP15-201ENST00000489210 795 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AL024509.2-201ENST00000493462 493 ntBASIC3.4□□□□□ -1.87
CBX1P83916 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CBX1P83916 AC091860.1-201ENST00000505723 432 ntBASIC3.4□□□□□ -1.87
CBX1P83916 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CBX1P83916 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.4□□□□□ -1.87
CBX1P83916 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 SNORA26.10-201ENST00000516427 141 ntBASIC3.4□□□□□ -1.87
CBX1P83916 RNA5SP135-201ENST00000517019 125 ntBASIC3.4□□□□□ -1.87
CBX1P83916 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 ARL2BPP5-201ENST00000523141 481 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AP003730.1-201ENST00000524605 285 ntBASIC3.4□□□□□ -1.87
CBX1P83916 ZNF705CP-201ENST00000530515 889 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.4□□□□□ -1.87
CBX1P83916 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.4□□□□□ -1.87
CBX1P83916 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.4□□□□□ -1.87
CBX1P83916 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 AC092354.2-201ENST00000607786 514 ntBASIC3.4□□□□□ -1.87
CBX1P83916 AF117829.1-206ENST00000621883 3802 ntBASIC3.4□□□□□ -1.87
CBX1P83916 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.4□□□□□ -1.87
CBX1P83916 MTND2P41-201ENST00000637599 773 ntBASIC3.4□□□□□ -1.87
CBX1P83916 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CBX1P83916 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.4□□□□□ -1.87
CBX1P83916 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.39□□□□□ -1.87
CBX1P83916 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CBX1P83916 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CBX1P83916 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CBX1P83916 RNU1-70P-201ENST00000362618 164 ntBASIC3.39□□□□□ -1.87
CBX1P83916 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.39□□□□□ -1.87
CBX1P83916 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CBX1P83916 OR8G2P-201ENST00000412796 908 ntBASIC3.39□□□□□ -1.87
CBX1P83916 RAD23BP2-201ENST00000416003 1207 ntBASIC3.39□□□□□ -1.87
CBX1P83916 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.39□□□□□ -1.87
CBX1P83916 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.39□□□□□ -1.87
CBX1P83916 KCTD10P1-201ENST00000434203 625 ntBASIC3.39□□□□□ -1.87
CBX1P83916 RPL23AP16-201ENST00000441715 421 ntBASIC3.39□□□□□ -1.87
CBX1P83916 AC017099.1-201ENST00000448261 1028 ntBASIC3.39□□□□□ -1.87
CBX1P83916 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.39□□□□□ -1.87
CBX1P83916 AC009220.1-201ENST00000451614 275 ntBASIC3.39□□□□□ -1.87
CBX1P83916 MTCO3P2-201ENST00000457365 171 ntBASIC3.39□□□□□ -1.87
CBX1P83916 PLGLA-201ENST00000465668 449 ntBASIC3.39□□□□□ -1.87
CBX1P83916 RPS17P11-201ENST00000474297 293 ntBASIC3.39□□□□□ -1.87
CBX1P83916 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CBX1P83916 GMPSP1-201ENST00000514075 579 ntBASIC3.39□□□□□ -1.87
CBX1P83916 MTCO2P32-201ENST00000514865 403 ntBASIC3.39□□□□□ -1.87
CBX1P83916 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.39□□□□□ -1.87
CBX1P83916 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CBX1P83916 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.39□□□□□ -1.87
CBX1P83916 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 AC010735.1-201ENST00000567305 1026 ntBASIC3.39□□□□□ -1.87
CBX1P83916 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 MTCO3P13-201ENST00000577757 781 ntBASIC3.39□□□□□ -1.87
CBX1P83916 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.39□□□□□ -1.87
CBX1P83916 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.39□□□□□ -1.87
CBX1P83916 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.39□□□□□ -1.87
CBX1P83916 AC112484.5-201ENST00000624189 228 ntBASIC3.39□□□□□ -1.87
CBX1P83916 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
CBX1P83916 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CBX1P83916 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CBX1P83916 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CBX1P83916 RNU6-582P-201ENST00000362989 107 ntBASIC3.38□□□□□ -1.87
CBX1P83916 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.38□□□□□ -1.87
CBX1P83916 RNU6-1249P-201ENST00000363237 111 ntBASIC3.38□□□□□ -1.87
CBX1P83916 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
CBX1P83916 SNORD116-23-201ENST00000384645 92 ntBASIC3.38□□□□□ -1.87
CBX1P83916 RNU6-821P-201ENST00000390995 107 ntBASIC3.38□□□□□ -1.87
CBX1P83916 AL590004.2-201ENST00000404787 371 ntBASIC3.38□□□□□ -1.87
CBX1P83916 ZNF602P-201ENST00000405929 924 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms