Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC127526.1-201ENST00000417526 366 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.79□□□□□ -2.12
PRKDCP78527 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.79□□□□□ -2.12
PRKDCP78527 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.79□□□□□ -2.12
PRKDCP78527 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC1.79□□□□□ -2.12
PRKDCP78527 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRKDCP78527 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PRKDCP78527 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
PRKDCP78527 TRBV26-201ENST00000456572 344 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 RPL23AP49-201ENST00000492925 468 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.79□□□□□ -2.12
PRKDCP78527 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC1.79□□□□□ -2.12
PRKDCP78527 ACTR6P1-201ENST00000514311 1104 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.79□□□□□ -2.12
PRKDCP78527 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.79□□□□□ -2.12
PRKDCP78527 RPS3AP4-201ENST00000555161 764 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 CR589904.2-201ENST00000612533 440 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.79□□□□□ -2.12
PRKDCP78527 AC099654.11-201ENST00000638857 294 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 MTND5P29-201ENST00000458676 1807 ntBASIC1.79□□□□□ -2.12
PRKDCP78527 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
PRKDCP78527 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
PRKDCP78527 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC1.78□□□□□ -2.12
PRKDCP78527 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.78□□□□□ -2.12
PRKDCP78527 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
PRKDCP78527 EI24P2-201ENST00000397776 1076 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
PRKDCP78527 RPS12P5-201ENST00000423449 371 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AL121877.1-201ENST00000453704 622 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 RPL36AP51-201ENST00000487216 318 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC1.78□□□□□ -2.12
PRKDCP78527 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
PRKDCP78527 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
PRKDCP78527 AC004925.1-201ENST00000624256 2706 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AC025125.1-201ENST00000624743 1922 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.78□□□□□ -2.12
PRKDCP78527 AC004520.1-201ENST00000608362 1413 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 SNORD114-26-201ENST00000363543 72 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
PRKDCP78527 RNU2-2P-201ENST00000410396 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 OR4T1P-201ENST00000554933 911 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC1.78□□□□□ -2.12
PRKDCP78527 U2.15-201ENST00000611544 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.16-201ENST00000613119 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.12-201ENST00000613778 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.20-201ENST00000613956 192 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AC008121.2-201ENST00000614647 523 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.9-201ENST00000615427 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AC022960.2-201ENST00000616300 666 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.11-201ENST00000616345 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.2-201ENST00000616535 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.3-201ENST00000617785 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.19-201ENST00000618602 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 RNU2-1-201ENST00000618664 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.6-201ENST00000619225 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.5-201ENST00000619465 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 U2.10-201ENST00000620268 191 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AL589994.2-201ENST00000621124 579 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 CRYM-AS1-204ENST00000637983 556 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC1.78□□□□□ -2.12
PRKDCP78527 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
PRKDCP78527 USP9YP6-201ENST00000413550 854 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.78□□□□□ -2.12
PRKDCP78527 USP9YP34-201ENST00000453983 808 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.78□□□□□ -2.12
PRKDCP78527 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.78□□□□□ -2.12
PRKDCP78527 RAC1P5-201ENST00000512182 576 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC1.78□□□□□ -2.12
PRKDCP78527 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.78□□□□□ -2.12
PRKDCP78527 MIR1291-201ENST00000627649 87 ntBASIC1.78□□□□□ -2.12
PRKDCP78527 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC1.78□□□□□ -2.13
PRKDCP78527 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 MIR148B-201ENST00000362252 99 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 AC069218.2-201ENST00000411665 344 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.77□□□□□ -2.13
PRKDCP78527 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC1.77□□□□□ -2.13
PRKDCP78527 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.77□□□□□ -2.13
PRKDCP78527 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.77□□□□□ -2.13
PRKDCP78527 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
PRKDCP78527 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 GCNT6-201ENST00000379591 934 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 FAR1P1-201ENST00000427163 934 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.77□□□□□ -2.13
PRKDCP78527 AC087385.1-201ENST00000475062 312 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 AL024509.2-201ENST00000493462 493 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 RN7SKP96-201ENST00000516948 297 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.77□□□□□ -2.13
PRKDCP78527 OR8L1P-201ENST00000534005 955 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 HMGN2P47-201ENST00000559378 272 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.77□□□□□ -2.13
PRKDCP78527 DLEU2_6.1-201ENST00000610536 112 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 RMST_2.1-201ENST00000617263 136 ntBASIC1.77□□□□□ -2.13
PRKDCP78527 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PRKDCP78527 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms