Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC1.58□□□□□ -2.16
RPL39P62891 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.58□□□□□ -2.16
RPL39P62891 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.58□□□□□ -2.16
RPL39P62891 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPL39P62891 AC090255.1-201ENST00000495779 349 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.58□□□□□ -2.16
RPL39P62891 MTCO1P30-201ENST00000515244 580 ntBASIC1.58□□□□□ -2.16
RPL39P62891 Vault.1-201ENST00000516474 102 ntBASIC1.58□□□□□ -2.16
RPL39P62891 RNA5SP82-201ENST00000516707 92 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AC239860.2-201ENST00000525886 270 ntBASIC1.58□□□□□ -2.16
RPL39P62891 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RPL39P62891 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.58□□□□□ -2.16
RPL39P62891 ELOCP29-201ENST00000588193 334 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AC007621.1-201ENST00000604544 437 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AC103810.6-201ENST00000606708 136 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AC013562.2-201ENST00000611632 603 ntBASIC1.58□□□□□ -2.16
RPL39P62891 MIR4278-201ENST00000636094 69 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AP000553.5-201ENST00000641933 54 ntBASIC1.58□□□□□ -2.16
RPL39P62891 MTCO1P6-201ENST00000481192 1384 ntBASIC1.58□□□□□ -2.16
RPL39P62891 AC026951.1-201ENST00000559530 2459 ntBASIC1.58□□□□□ -2.16
RPL39P62891 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
RPL39P62891 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
RPL39P62891 AC016717.2-201ENST00000609089 5141 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL39P62891 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RPL39P62891 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC1.57□□□□□ -2.16
RPL39P62891 SNORA51.11-201ENST00000384442 131 ntBASIC1.57□□□□□ -2.16
RPL39P62891 SNORA11B-201ENST00000408175 129 ntBASIC1.57□□□□□ -2.16
RPL39P62891 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.57□□□□□ -2.16
RPL39P62891 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL39P62891 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL39P62891 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL39P62891 RNU6-717P-201ENST00000459076 104 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC004263.1-201ENST00000479327 332 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC011825.1-201ENST00000484967 388 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC109486.1-201ENST00000486833 374 ntBASIC1.57□□□□□ -2.16
RPL39P62891 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL39P62891 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.57□□□□□ -2.16
RPL39P62891 HMGB1P23-201ENST00000518743 568 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.57□□□□□ -2.16
RPL39P62891 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.57□□□□□ -2.16
RPL39P62891 AP004242.1-201ENST00000533701 349 ntBASIC1.57□□□□□ -2.16
RPL39P62891 ISCA1P3-201ENST00000577104 373 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL39P62891 AL451007.1-201ENST00000595491 289 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AL035413.2-201ENST00000604801 525 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.57□□□□□ -2.16
RPL39P62891 AC046143.2-201ENST00000609789 160 ntBASIC1.57□□□□□ -2.16
RPL39P62891 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.57□□□□□ -2.16
RPL39P62891 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.57□□□□□ -2.16
RPL39P62891 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPL39P62891 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.56□□□□□ -2.16
RPL39P62891 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 RNA5SP37-201ENST00000365420 130 ntBASIC1.56□□□□□ -2.16
RPL39P62891 RNU6-301P-201ENST00000384277 107 ntBASIC1.56□□□□□ -2.16
RPL39P62891 AP000567.1-201ENST00000406413 156 ntBASIC1.56□□□□□ -2.16
RPL39P62891 RN7SKP222-201ENST00000410651 315 ntBASIC1.56□□□□□ -2.16
RPL39P62891 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC1.56□□□□□ -2.16
RPL39P62891 HMGB1P11-201ENST00000413899 637 ntBASIC1.56□□□□□ -2.16
RPL39P62891 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL39P62891 OR6C71P-201ENST00000432580 913 ntBASIC1.56□□□□□ -2.16
RPL39P62891 DPPA3P1-201ENST00000448050 469 ntBASIC1.56□□□□□ -2.16
RPL39P62891 RPL23AP7-203ENST00000449021 469 ntBASIC1.56□□□□□ -2.16
RPL39P62891 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.56□□□□□ -2.16
RPL39P62891 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL39P62891 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC1.56□□□□□ -2.16
RPL39P62891 AL024509.2-201ENST00000493462 493 ntBASIC1.56□□□□□ -2.16
RPL39P62891 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.56□□□□□ -2.16
RPL39P62891 AC234781.5-201ENST00000508429 271 ntBASIC1.56□□□□□ -2.16
RPL39P62891 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 UBTFL10-201ENST00000528532 562 ntBASIC1.56□□□□□ -2.16
RPL39P62891 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.56□□□□□ -2.16
RPL39P62891 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.56□□□□□ -2.16
RPL39P62891 SERPINE4P-201ENST00000554978 281 ntBASIC1.56□□□□□ -2.16
RPL39P62891 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.56□□□□□ -2.16
RPL39P62891 ACTR3BP3-201ENST00000565577 979 ntBASIC1.56□□□□□ -2.16
RPL39P62891 MYL12BP1-201ENST00000569826 507 ntBASIC1.56□□□□□ -2.16
RPL39P62891 LRRC37A5P-203ENST00000580181 585 ntBASIC1.56□□□□□ -2.16
RPL39P62891 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
RPL39P62891 AC008432.1-201ENST00000615912 1320 ntBASIC1.56□□□□□ -2.16
RPL39P62891 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.56□□□□□ -2.16
RPL39P62891 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 AC092111.2-201ENST00000611627 1414 ntBASIC1.56□□□□□ -2.16
RPL39P62891 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPL39P62891 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RPL39P62891 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
RPL39P62891 AC103988.1-201ENST00000566382 2177 ntBASIC1.55□□□□□ -2.16
RPL39P62891 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 MIR196B-201ENST00000384852 84 ntBASIC1.55□□□□□ -2.16
RPL39P62891 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPL39P62891 HSPE1P26-201ENST00000405341 275 ntBASIC1.55□□□□□ -2.16
RPL39P62891 AL356967.1-201ENST00000406305 431 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms