Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.61□□□□□ -1.83
SRP54P61011 AC068533.1-201ENST00000418542 415 ntBASIC3.61□□□□□ -1.83
SRP54P61011 KRR1P1-201ENST00000419430 803 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC245054.1-201ENST00000420944 258 ntBASIC3.61□□□□□ -1.83
SRP54P61011 MTCO3P1-205ENST00000422088 832 ntBASIC3.61□□□□□ -1.83
SRP54P61011 HSFY1P1-201ENST00000423928 1178 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.61□□□□□ -1.83
SRP54P61011 DPRXP1-201ENST00000426312 460 ntBASIC3.61□□□□□ -1.83
SRP54P61011 RAC1P8-201ENST00000427086 527 ntBASIC3.61□□□□□ -1.83
SRP54P61011 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.61□□□□□ -1.83
SRP54P61011 CYCSP43-201ENST00000438233 310 ntBASIC3.61□□□□□ -1.83
SRP54P61011 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 AC127537.2-201ENST00000439258 465 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.61□□□□□ -1.83
SRP54P61011 MTCO3P16-201ENST00000454456 754 ntBASIC3.61□□□□□ -1.83
SRP54P61011 RPL23AP55-201ENST00000498163 452 ntBASIC3.61□□□□□ -1.83
SRP54P61011 CAB39P1-201ENST00000502277 460 ntBASIC3.61□□□□□ -1.83
SRP54P61011 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SRP54P61011 PHBP14-201ENST00000512887 367 ntBASIC3.61□□□□□ -1.83
SRP54P61011 RN7SKP244-201ENST00000516513 307 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 AC027309.2-201ENST00000520566 192 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.61□□□□□ -1.83
SRP54P61011 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.61□□□□□ -1.83
SRP54P61011 OR5B10P-201ENST00000532869 642 ntBASIC3.61□□□□□ -1.83
SRP54P61011 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SRP54P61011 AC008011.1-201ENST00000545989 227 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 MIR3690-201ENST00000580266 75 ntBASIC3.61□□□□□ -1.83
SRP54P61011 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.61□□□□□ -1.83
SRP54P61011 AC020914.6-201ENST00000594327 272 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.61□□□□□ -1.83
SRP54P61011 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.61□□□□□ -1.83
SRP54P61011 AC006023.2-201ENST00000609916 167 ntBASIC3.61□□□□□ -1.83
SRP54P61011 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC015967.1-201ENST00000619893 476 ntBASIC3.61□□□□□ -1.83
SRP54P61011 AC006963.1-201ENST00000624003 1052 ntBASIC3.61□□□□□ -1.83
SRP54P61011 MTND2P41-201ENST00000637599 773 ntBASIC3.61□□□□□ -1.83
SRP54P61011 MFSD8-245ENST00000641743 948 ntBASIC3.61□□□□□ -1.83
SRP54P61011 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP54P61011 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SRP54P61011 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
SRP54P61011 AF127577.6-201ENST00000623352 2191 ntBASIC3.61□□□□□ -1.83
SRP54P61011 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 AL021368.2-201ENST00000606125 5352 ntBASIC3.6□□□□□ -1.83
SRP54P61011 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SRP54P61011 MIR208A-201ENST00000362287 71 ntBASIC3.6□□□□□ -1.83
SRP54P61011 SNORD9-201ENST00000362566 104 ntBASIC3.6□□□□□ -1.83
SRP54P61011 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.6□□□□□ -1.83
SRP54P61011 RNU6-1300P-201ENST00000391046 108 ntBASIC3.6□□□□□ -1.83
SRP54P61011 RNU6-1000P-201ENST00000391066 106 ntBASIC3.6□□□□□ -1.83
SRP54P61011 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP54P61011 MTND4P3-201ENST00000417829 541 ntBASIC3.6□□□□□ -1.83
SRP54P61011 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP54P61011 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.6□□□□□ -1.83
SRP54P61011 MTCO1P3-201ENST00000429327 192 ntBASIC3.6□□□□□ -1.83
SRP54P61011 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP54P61011 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.6□□□□□ -1.83
SRP54P61011 AC010655.1-201ENST00000449336 292 ntBASIC3.6□□□□□ -1.83
SRP54P61011 RPS24P6-201ENST00000452670 400 ntBASIC3.6□□□□□ -1.83
SRP54P61011 AC073387.1-201ENST00000453261 709 ntBASIC3.6□□□□□ -1.83
SRP54P61011 PRSS3P4-201ENST00000453323 162 ntBASIC3.6□□□□□ -1.83
SRP54P61011 SNRPGP3-201ENST00000469405 227 ntBASIC3.6□□□□□ -1.83
SRP54P61011 VN1R17P-201ENST00000472048 1090 ntBASIC3.6□□□□□ -1.83
SRP54P61011 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 AC108078.3-201ENST00000502633 489 ntBASIC3.6□□□□□ -1.83
SRP54P61011 SUMO2P5-201ENST00000506790 245 ntBASIC3.6□□□□□ -1.83
SRP54P61011 RANP9-201ENST00000519957 271 ntBASIC3.6□□□□□ -1.83
SRP54P61011 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 AC109635.4-202ENST00000531666 412 ntBASIC3.6□□□□□ -1.83
SRP54P61011 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.6□□□□□ -1.83
SRP54P61011 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP54P61011 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP54P61011 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.6□□□□□ -1.83
SRP54P61011 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.6□□□□□ -1.83
SRP54P61011 AL590282.1-201ENST00000610379 1136 ntBASIC3.6□□□□□ -1.83
SRP54P61011 RNVU1-4-201ENST00000612985 164 ntBASIC3.6□□□□□ -1.83
SRP54P61011 AC008083.4-201ENST00000615076 444 ntBASIC3.6□□□□□ -1.83
SRP54P61011 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.6□□□□□ -1.83
SRP54P61011 AL357559.1-201ENST00000622228 274 ntBASIC3.6□□□□□ -1.83
SRP54P61011 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.6□□□□□ -1.83
SRP54P61011 ZNF663P-202ENST00000641770 1131 ntBASIC3.6□□□□□ -1.83
SRP54P61011 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.6□□□□□ -1.83
SRP54P61011 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SRP54P61011 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.6□□□□□ -1.83
SRP54P61011 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SRP54P61011 AC007823.1-201ENST00000569932 1566 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms