Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 ZNF705CP-201ENST00000530515 889 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 UBE2NP1-201ENST00000545592 458 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 OR6C73P-201ENST00000546432 358 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC090502.2-201ENST00000549267 280 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 LSM6P2-201ENST00000552208 177 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.24□□□□□ -1.73
HDAC4P56524 AC090616.2-202ENST00000584248 222 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.24□□□□□ -1.73
HDAC4P56524 AC121247.2-201ENST00000604776 136 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC018714.1-201ENST00000605028 208 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC069304.2-201ENST00000605154 435 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC4P56524 AP001521.1-201ENST00000609150 300 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC245297.2-201ENST00000610119 565 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL607023.1-201ENST00000620045 248 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 C2orf27A-204ENST00000623058 969 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AC092184.1-201ENST00000625042 715 ntBASIC4.24□□□□□ -1.73
HDAC4P56524 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.24□□□□□ -1.73
HDAC4P56524 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
HDAC4P56524 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
HDAC4P56524 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC4P56524 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HDAC4P56524 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.24□□□□□ -1.73
HDAC4P56524 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HDAC4P56524 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HDAC4P56524 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
HDAC4P56524 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.23□□□□□ -1.73
HDAC4P56524 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC4P56524 SKINT1L-201ENST00000401057 817 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 MIR1302-8-201ENST00000408342 128 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 RNA5SP306-201ENST00000411087 107 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 HSPE1P12-201ENST00000412576 301 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AL133384.1-201ENST00000412744 351 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 TIMM9P2-201ENST00000419324 266 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AL390023.1-201ENST00000428836 262 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC4P56524 Z95327.1-201ENST00000446082 482 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 RPS27AP8-201ENST00000452665 445 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 RPL38P1-201ENST00000460914 211 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 LINC00888-204ENST00000487386 421 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 OR4G11P-201ENST00000492842 939 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 NIPA2P2-201ENST00000496376 1083 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 RPL7P47-201ENST00000497299 556 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.23□□□□□ -1.73
HDAC4P56524 AC111000.2-201ENST00000507775 550 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.23□□□□□ -1.73
HDAC4P56524 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.23□□□□□ -1.73
HDAC4P56524 MTCO1P35-201ENST00000515270 228 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC104057.1-201ENST00000515547 497 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 RNU6-232P-201ENST00000517144 64 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 IGKV2-23-201ENST00000518729 323 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 AL389895.1-201ENST00000554127 252 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 AC106785.1-201ENST00000565935 262 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 ISCA1P3-201ENST00000577104 373 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 PIGPP4-201ENST00000584447 307 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 AL022161.1-201ENST00000604390 213 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC104662.1-201ENST00000604448 511 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC245389.1-201ENST00000605141 529 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC112220.3-201ENST00000605502 502 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AC006270.3-201ENST00000605967 1036 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.23□□□□□ -1.73
HDAC4P56524 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 ZNF37BP-203ENST00000452306 1352 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.23□□□□□ -1.73
HDAC4P56524 AL390862.1-201ENST00000635467 1469 ntBASIC4.23□□□□□ -1.73
HDAC4P56524 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.23□□□□□ -1.73
HDAC4P56524 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HDAC4P56524 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HDAC4P56524 AL121657.1-201ENST00000327215 531 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 MIR423-201ENST00000362201 94 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 SNORA60-201ENST00000362396 134 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 SNORD35B-201ENST00000363660 87 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 RNU6-553P-201ENST00000364047 96 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 RNA5SP130-201ENST00000364431 114 ntBASIC4.22□□□□□ -1.73
HDAC4P56524 RNU6-1226P-201ENST00000384317 107 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms