Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AC068538.1-201ENST00000376856 336 ntBASIC4.49□□□□□ -1.69
COPB1P53618 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.49□□□□□ -1.69
COPB1P53618 RAD23BP2-201ENST00000416003 1207 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AC008280.1-201ENST00000418851 412 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.49□□□□□ -1.69
COPB1P53618 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.49□□□□□ -1.69
COPB1P53618 BMS1P19-201ENST00000433925 393 ntBASIC4.49□□□□□ -1.69
COPB1P53618 MTND1P4-201ENST00000435196 415 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.49□□□□□ -1.69
COPB1P53618 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.49□□□□□ -1.69
COPB1P53618 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 AC096751.1-202ENST00000502691 1067 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.49□□□□□ -1.69
COPB1P53618 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.49□□□□□ -1.69
COPB1P53618 RNU6-405P-201ENST00000516637 110 ntBASIC4.49□□□□□ -1.69
COPB1P53618 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.49□□□□□ -1.69
COPB1P53618 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.49□□□□□ -1.69
COPB1P53618 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.49□□□□□ -1.69
COPB1P53618 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.49□□□□□ -1.69
COPB1P53618 MTND1P15-201ENST00000579262 949 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AP001004.1-201ENST00000582468 324 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.49□□□□□ -1.69
COPB1P53618 AL161729.3-201ENST00000603533 673 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AC107214.2-201ENST00000608204 634 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AL357080.1-201ENST00000617394 239 ntBASIC4.49□□□□□ -1.69
COPB1P53618 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 AC067931.1-201ENST00000624190 671 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AL356596.1-201ENST00000624230 379 ntBASIC4.49□□□□□ -1.69
COPB1P53618 AL079343.1-201ENST00000572358 1771 ntBASIC4.49□□□□□ -1.69
COPB1P53618 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COPB1P53618 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COPB1P53618 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.49□□□□□ -1.69
COPB1P53618 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
COPB1P53618 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.48□□□□□ -1.69
COPB1P53618 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 RNU6-462P-201ENST00000362659 105 ntBASIC4.48□□□□□ -1.69
COPB1P53618 RNU1-132P-201ENST00000364300 164 ntBASIC4.48□□□□□ -1.69
COPB1P53618 RNU6-657P-201ENST00000383904 107 ntBASIC4.48□□□□□ -1.69
COPB1P53618 RNU6-723P-201ENST00000383973 107 ntBASIC4.48□□□□□ -1.69
COPB1P53618 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 AC073264.1-201ENST00000411508 416 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 PRELID3BP11-201ENST00000414230 479 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.48□□□□□ -1.69
COPB1P53618 AL391219.1-201ENST00000422570 483 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.48□□□□□ -1.69
COPB1P53618 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.48□□□□□ -1.69
COPB1P53618 RPL12P34-201ENST00000424532 479 ntBASIC4.48□□□□□ -1.69
COPB1P53618 NPM1P24-201ENST00000428039 894 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AL358472.1-201ENST00000431295 329 ntBASIC4.48□□□□□ -1.69
COPB1P53618 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.48□□□□□ -1.69
COPB1P53618 ELOCP10-201ENST00000440624 327 ntBASIC4.48□□□□□ -1.69
COPB1P53618 EEF1E1P1-201ENST00000446998 430 ntBASIC4.48□□□□□ -1.69
COPB1P53618 SSXP1-201ENST00000453640 473 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC093899.1-201ENST00000457984 376 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC013356.1-201ENST00000489027 564 ntBASIC4.48□□□□□ -1.69
COPB1P53618 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.48□□□□□ -1.69
COPB1P53618 OR4G11P-201ENST00000492842 939 ntBASIC4.48□□□□□ -1.69
COPB1P53618 MTND2P33-201ENST00000506452 1031 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 AC006499.2-201ENST00000513470 337 ntBASIC4.48□□□□□ -1.69
COPB1P53618 SOD1P3-201ENST00000518682 454 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.48□□□□□ -1.69
COPB1P53618 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.48□□□□□ -1.69
COPB1P53618 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.48□□□□□ -1.69
COPB1P53618 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.48□□□□□ -1.69
COPB1P53618 MTATP6P3-201ENST00000581686 676 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 ELOCP34-201ENST00000604436 327 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC090186.1-201ENST00000605991 572 ntBASIC4.48□□□□□ -1.69
COPB1P53618 RNU6-88P-201ENST00000606801 100 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AC103858.2-201ENST00000621471 543 ntBASIC4.48□□□□□ -1.69
COPB1P53618 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.48□□□□□ -1.69
COPB1P53618 AC116667.1-201ENST00000604855 2072 ntBASIC4.48□□□□□ -1.69
COPB1P53618 USP9YP4-201ENST00000424401 1745 ntBASIC4.48□□□□□ -1.69
COPB1P53618 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.48□□□□□ -1.69
COPB1P53618 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COPB1P53618 AC139713.2-214ENST00000642059 1811 ntBASIC4.48□□□□□ -1.69
COPB1P53618 MTCO1P14-201ENST00000441695 1559 ntBASIC4.48□□□□□ -1.69
COPB1P53618 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms