Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP98P52948 FDX1P2-201ENST00000450769 375 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
NUP98P52948 VN1R17P-201ENST00000472048 1090 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NUP98P52948 MIR4512-201ENST00000583257 77 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AC009977.1-201ENST00000586015 570 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AC107871.2-201ENST00000612894 502 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AL162233.1-201ENST00000620014 944 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AC092628.2-201ENST00000622492 339 ntBASIC3.03□□□□□ -1.92
NUP98P52948 AC095050.2-201ENST00000510748 1458 ntBASIC3.03□□□□□ -1.92
NUP98P52948 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP98P52948 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP98P52948 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP98P52948 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
NUP98P52948 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.03□□□□□ -1.93
NUP98P52948 MIR3074-201ENST00000384885 81 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AL162578.1-201ENST00000406202 378 ntBASIC3.03□□□□□ -1.93
NUP98P52948 RNA5SP129-201ENST00000410276 118 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AC098592.2-201ENST00000413158 265 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AL390023.1-201ENST00000428836 262 ntBASIC3.03□□□□□ -1.93
NUP98P52948 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.03□□□□□ -1.93
NUP98P52948 EXTL2P1-201ENST00000446218 416 ntBASIC3.03□□□□□ -1.93
NUP98P52948 HIGD1AP2-201ENST00000446367 280 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AL353705.4-201ENST00000449661 238 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AL162388.1-201ENST00000450912 352 ntBASIC3.03□□□□□ -1.93
NUP98P52948 NIPA2P2-201ENST00000496376 1083 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.03□□□□□ -1.93
NUP98P52948 OR8X1P-201ENST00000534542 869 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.03□□□□□ -1.93
NUP98P52948 AC061975.8-201ENST00000587058 721 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AL139286.1-201ENST00000604465 483 ntBASIC3.03□□□□□ -1.93
NUP98P52948 AC010200.2-201ENST00000605098 235 ntBASIC3.03□□□□□ -1.93
NUP98P52948 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.02□□□□□ -1.93
NUP98P52948 AC009313.2-201ENST00000417893 1941 ntBASIC3.02□□□□□ -1.93
NUP98P52948 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP98P52948 RNU6-1331P-201ENST00000363658 106 ntBASIC3.02□□□□□ -1.93
NUP98P52948 MTATP6P11-201ENST00000428071 670 ntBASIC3.02□□□□□ -1.93
NUP98P52948 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
NUP98P52948 OR4A45P-201ENST00000529954 901 ntBASIC3.02□□□□□ -1.93
NUP98P52948 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.02□□□□□ -1.93
NUP98P52948 FAM106CP-201ENST00000582212 507 ntBASIC3.02□□□□□ -1.93
NUP98P52948 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.02□□□□□ -1.93
NUP98P52948 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP98P52948 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NUP98P52948 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
NUP98P52948 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 OR51A3P-201ENST00000413596 924 ntBASIC3.01□□□□□ -1.93
NUP98P52948 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.01□□□□□ -1.93
NUP98P52948 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP98P52948 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP98P52948 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP98P52948 AC021205.1-201ENST00000468797 348 ntBASIC3.01□□□□□ -1.93
NUP98P52948 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 AC108471.1-201ENST00000513977 287 ntBASIC3.01□□□□□ -1.93
NUP98P52948 AC021269.2-201ENST00000532318 330 ntBASIC3.01□□□□□ -1.93
NUP98P52948 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP98P52948 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP98P52948 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP98P52948 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP98P52948 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP98P52948 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP98P52948 AC010329.2-201ENST00000595195 2737 ntBASIC3.01□□□□□ -1.93
NUP98P52948 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP98P52948 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
NUP98P52948 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUP98P52948 RNU6-618P-201ENST00000363518 112 ntBASIC3□□□□□ -1.93
NUP98P52948 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3□□□□□ -1.93
NUP98P52948 AC244033.1-201ENST00000426826 870 ntBASIC3□□□□□ -1.93
NUP98P52948 RAB9AP5-201ENST00000437794 597 ntBASIC3□□□□□ -1.93
NUP98P52948 RPS12P2-201ENST00000439728 269 ntBASIC3□□□□□ -1.93
NUP98P52948 RAB9AP2-201ENST00000443911 597 ntBASIC3□□□□□ -1.93
NUP98P52948 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3□□□□□ -1.93
NUP98P52948 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3□□□□□ -1.93
NUP98P52948 RPL7L1P13-201ENST00000511702 739 ntBASIC3□□□□□ -1.93
NUP98P52948 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3□□□□□ -1.93
NUP98P52948 AP001207.1-201ENST00000524051 481 ntBASIC3□□□□□ -1.93
NUP98P52948 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3□□□□□ -1.93
NUP98P52948 AP003072.5-201ENST00000623872 773 ntBASIC3□□□□□ -1.93
NUP98P52948 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NUP98P52948 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3□□□□□ -1.93
NUP98P52948 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3□□□□□ -1.93
NUP98P52948 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NUP98P52948 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
NUP98P52948 RNU6-225P-201ENST00000384613 103 ntBASIC3□□□□□ -1.93
NUP98P52948 AL158825.1-201ENST00000414735 521 ntBASIC3□□□□□ -1.93
NUP98P52948 AL354710.1-201ENST00000453641 246 ntBASIC3□□□□□ -1.93
NUP98P52948 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3□□□□□ -1.93
NUP98P52948 OR7K1P-201ENST00000546439 926 ntBASIC3□□□□□ -1.93
NUP98P52948 MIR1273D-201ENST00000577266 86 ntBASIC3□□□□□ -1.93
NUP98P52948 MIR4524B-201ENST00000581569 115 ntBASIC3□□□□□ -1.93
NUP98P52948 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3□□□□□ -1.93
NUP98P52948 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3□□□□□ -1.93
NUP98P52948 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
NUP98P52948 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms