Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 RPP40P1-201ENST00000426762 456 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC1P51610 USP9YP31-201ENST00000431405 881 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 AL031663.1-201ENST00000437445 219 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AL445567.1-201ENST00000439121 144 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.26□□□□□ -1.89
HCFC1P51610 AC092809.1-201ENST00000441469 474 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 RPS26P30-201ENST00000443431 335 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 NF1P3-201ENST00000457709 450 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.26□□□□□ -1.89
HCFC1P51610 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1P51610 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1P51610 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HCFC1P51610 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1P51610 SNORA70.18-201ENST00000516696 98 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 AC087808.1-201ENST00000520501 361 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.26□□□□□ -1.89
HCFC1P51610 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1P51610 AC123768.4-201ENST00000616244 701 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AL512506.2-201ENST00000624472 458 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1P51610 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1P51610 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.26□□□□□ -1.89
HCFC1P51610 AC116618.1-201ENST00000634617 774 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 AC068620.4-201ENST00000636730 1182 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 MIR6715B-201ENST00000637172 77 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 MKKS-204ENST00000639674 192 ntBASIC3.26□□□□□ -1.89
HCFC1P51610 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HCFC1P51610 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 AC007823.1-201ENST00000569932 1566 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HCFC1P51610 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 Y_RNA.302-201ENST00000364997 102 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.25□□□□□ -1.89
HCFC1P51610 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1P51610 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.25□□□□□ -1.89
HCFC1P51610 AL357520.1-201ENST00000441557 453 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 RPL23AP76-201ENST00000441860 458 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.25□□□□□ -1.89
HCFC1P51610 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1P51610 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.25□□□□□ -1.89
HCFC1P51610 RNU6-1218P-201ENST00000458990 108 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.25□□□□□ -1.89
HCFC1P51610 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
HCFC1P51610 FTH1P24-201ENST00000503502 462 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 AC112198.1-201ENST00000505369 1220 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1P51610 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.25□□□□□ -1.89
HCFC1P51610 Y_RNA.688-201ENST00000516565 95 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.25□□□□□ -1.89
HCFC1P51610 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.25□□□□□ -1.89
HCFC1P51610 MIR5186-201ENST00000577504 120 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1P51610 AC091946.2-201ENST00000606105 291 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC131235.4-201ENST00000609288 620 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AL354976.1-201ENST00000613843 387 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 AC122133.1-201ENST00000613964 233 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 MIR8057-201ENST00000620957 69 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 Z69908.1-201ENST00000622603 247 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 AC087359.1-201ENST00000508335 1740 ntBASIC3.25□□□□□ -1.89
HCFC1P51610 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HCFC1P51610 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.25□□□□□ -1.89
HCFC1P51610 AL049737.1-201ENST00000413920 1403 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HCFC1P51610 PHKBP1-201ENST00000450951 1951 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC018555.1-201ENST00000567548 1980 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
HCFC1P51610 RNU6-839P-201ENST00000363347 108 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 RNU6-1066P-201ENST00000363573 105 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 RNVU1-14-201ENST00000384770 164 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 LUZP4P1-201ENST00000415420 344 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.24□□□□□ -1.89
HCFC1P51610 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 Z75741.1-201ENST00000446793 314 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.24□□□□□ -1.89
HCFC1P51610 ART2BP-201ENST00000453501 499 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 NECAP1P2-201ENST00000455668 727 ntBASIC3.24□□□□□ -1.89
HCFC1P51610 AL133477.1-201ENST00000457472 514 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms