Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC044810.1-201ENST00000480271 711 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 RNU7-4P-201ENST00000516961 62 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 HMGN1P28-201ENST00000521340 364 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF144AP50876 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF144AP50876 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF144AP50876 MIR3189-201ENST00000578735 73 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 RNU4ATAC-201ENST00000580972 127 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 VN1R91P-201ENST00000594377 169 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 AC015819.1-201ENST00000613588 663 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF144AP50876 AOX3P-204ENST00000491025 2107 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 AC010266.2-201ENST00000564741 3255 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RNF144AP50876 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 AL034546.1-201ENST00000623740 3693 ntBASIC5.78□□□□□ -1.48
RNF144AP50876 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RNF144AP50876 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RNF144AP50876 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF144AP50876 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
RNF144AP50876 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF144AP50876 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF144AP50876 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF144AP50876 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF144AP50876 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF144AP50876 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RNF144AP50876 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF144AP50876 RBPJP2-201ENST00000618187 1444 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC011933.2-201ENST00000578539 2790 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF144AP50876 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF144AP50876 SMIM11P1-201ENST00000369586 178 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AL139039.1-201ENST00000401900 692 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF144AP50876 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF144AP50876 HMGB3P24-201ENST00000433260 622 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC064862.5-201ENST00000440618 334 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AL138752.1-201ENST00000452964 351 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.77□□□□□ -1.49
RNF144AP50876 RNU7-169P-201ENST00000459456 61 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF144AP50876 AC087385.1-201ENST00000475062 312 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC069499.1-201ENST00000489433 509 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 SNRPCP11-201ENST00000492453 205 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC114324.2-202ENST00000503812 134 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC012339.2-201ENST00000523996 453 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF144AP50876 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF144AP50876 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF144AP50876 OR4H6P-201ENST00000563771 921 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
RNF144AP50876 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF144AP50876 MIR4420-201ENST00000583944 77 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF144AP50876 AC010900.2-201ENST00000604508 210 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC022467.1-201ENST00000614738 749 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 MIR7159-201ENST00000620587 66 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC073592.6-201ENST00000624271 415 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF144AP50876 SHQ1P1-201ENST00000437111 1544 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 AC024587.1-201ENST00000505925 2157 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.77□□□□□ -1.49
RNF144AP50876 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF144AP50876 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF144AP50876 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RNF144AP50876 AP005432.1-201ENST00000580891 3485 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.76□□□□□ -1.49
RNF144AP50876 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
RNF144AP50876 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 RNU6-545P-201ENST00000362681 104 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 RNU1-130P-201ENST00000363930 160 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 RNA5SP240-201ENST00000365355 128 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 MIR191-201ENST00000384873 92 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 HMGB1P20-201ENST00000402555 677 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AL121835.1-201ENST00000404250 354 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 SYF2P2-201ENST00000417620 583 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.76□□□□□ -1.49
RNF144AP50876 AC069213.2-201ENST00000420238 366 ntBASIC5.76□□□□□ -1.49
RNF144AP50876 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.76□□□□□ -1.49
RNF144AP50876 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RNF144AP50876 C4BPAP2-201ENST00000428434 478 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms