Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.82□□□□□ -1.8
HNF4AP41235 DPRXP1-201ENST00000426312 460 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AL365396.1-201ENST00000430854 671 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 USP9YP31-201ENST00000431405 881 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.82□□□□□ -1.8
HNF4AP41235 MTCYBP31-201ENST00000438855 1122 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 MTCYBP42-201ENST00000444653 1130 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 COX6CP18-201ENST00000448769 222 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.82□□□□□ -1.8
HNF4AP41235 snoU109.4-201ENST00000458953 143 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 RPS4XP15-201ENST00000489210 795 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AC110792.1-201ENST00000491826 472 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AC026726.1-201ENST00000512859 601 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 MTATP6P15-201ENST00000527233 835 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 HIGD1AP10-201ENST00000527837 282 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.82□□□□□ -1.8
HNF4AP41235 AC126177.3-201ENST00000551839 688 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.82□□□□□ -1.8
HNF4AP41235 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.82□□□□□ -1.8
HNF4AP41235 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.82□□□□□ -1.8
HNF4AP41235 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.82□□□□□ -1.8
HNF4AP41235 NIFKP6-201ENST00000598115 845 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 MTND3P19-201ENST00000603825 345 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AL451086.1-201ENST00000605596 223 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 AC092106.3-201ENST00000611308 722 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AC231759.1-201ENST00000616455 597 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 CYP3A51P-201ENST00000633513 256 ntBASIC3.82□□□□□ -1.8
HNF4AP41235 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.82□□□□□ -1.8
HNF4AP41235 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
HNF4AP41235 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HNF4AP41235 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.81□□□□□ -1.8
HNF4AP41235 AF117829.1-206ENST00000621883 3802 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
HNF4AP41235 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.81□□□□□ -1.8
HNF4AP41235 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 RNA5SP283-201ENST00000365604 119 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 MIR591-201ENST00000385290 95 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 RNU6-1300P-201ENST00000391046 108 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 RHEBP3-201ENST00000411920 351 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.81□□□□□ -1.8
HNF4AP41235 RPS24P7-201ENST00000416921 246 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC004975.1-201ENST00000428733 208 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AL117339.2-201ENST00000430475 180 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.81□□□□□ -1.8
HNF4AP41235 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.81□□□□□ -1.8
HNF4AP41235 OR9M1P-201ENST00000459641 921 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC092754.2-201ENST00000463506 460 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC103987.1-201ENST00000473394 348 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 RPS27AP1-201ENST00000475545 471 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 RPL7P24-201ENST00000493052 752 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC021146.1-201ENST00000511202 716 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 RNA5SP179-201ENST00000517284 121 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.81□□□□□ -1.8
HNF4AP41235 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 MTCO3P15-201ENST00000526563 574 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 UBTFL10-201ENST00000528532 562 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 DEFB130C-202ENST00000530001 230 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 OR4P1P-201ENST00000530808 1136 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.81□□□□□ -1.8
HNF4AP41235 AC090502.2-201ENST00000549267 280 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
HNF4AP41235 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 AL389895.1-201ENST00000554127 252 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 MTND4P33-201ENST00000556706 766 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 AC015688.2-201ENST00000584523 262 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 AC008751.2-201ENST00000597885 980 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC010738.1-201ENST00000604970 987 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC091167.4-201ENST00000605079 184 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.81□□□□□ -1.8
HNF4AP41235 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 MIR8058-201ENST00000615737 89 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AC013470.4-201ENST00000619978 986 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 AL157770.1-201ENST00000623049 439 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 AC090897.3-201ENST00000636973 1157 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
HNF4AP41235 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
HNF4AP41235 AC010733.2-201ENST00000589496 5702 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 HSPA8P1-201ENST00000425843 1833 ntBASIC3.81□□□□□ -1.8
HNF4AP41235 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HNF4AP41235 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
HNF4AP41235 AP002001.2-201ENST00000529025 1469 ntBASIC3.8□□□□□ -1.8
HNF4AP41235 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms