Protein–RNA interactions for Protein: P30536

TSPO, Translocator protein, humanhuman

Predictions only

Length 169 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPOP30536 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.59□□□□□ -1.99
TSPOP30536 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.59□□□□□ -1.99
TSPOP30536 AC104307.1-201ENST00000616142 196 ntBASIC2.59□□□□□ -1.99
TSPOP30536 AC002076.2-201ENST00000617362 122 ntBASIC2.59□□□□□ -1.99
TSPOP30536 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TSPOP30536 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.59□□□□□ -1.99
TSPOP30536 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.59□□□□□ -1.99
TSPOP30536 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
TSPOP30536 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TSPOP30536 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.59□□□□□ -2
TSPOP30536 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
TSPOP30536 API5P2-201ENST00000397055 1498 ntBASIC2.58□□□□□ -2
TSPOP30536 SGO1P2-201ENST00000429458 1589 ntBASIC2.58□□□□□ -2
TSPOP30536 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 SNORD9-201ENST00000362566 104 ntBASIC2.58□□□□□ -2
TSPOP30536 Y_RNA.126-201ENST00000363382 111 ntBASIC2.58□□□□□ -2
TSPOP30536 RNA5SP51-201ENST00000364750 119 ntBASIC2.58□□□□□ -2
TSPOP30536 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 RPL7P60-201ENST00000397636 735 ntBASIC2.58□□□□□ -2
TSPOP30536 MTND4LP20-201ENST00000402379 270 ntBASIC2.58□□□□□ -2
TSPOP30536 ATF1P1-201ENST00000406040 927 ntBASIC2.58□□□□□ -2
TSPOP30536 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.58□□□□□ -2
TSPOP30536 AC006960.1-201ENST00000419980 153 ntBASIC2.58□□□□□ -2
TSPOP30536 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.58□□□□□ -2
TSPOP30536 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.58□□□□□ -2
TSPOP30536 RPL23AP82-202ENST00000427528 469 ntBASIC2.58□□□□□ -2
TSPOP30536 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.58□□□□□ -2
TSPOP30536 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.58□□□□□ -2
TSPOP30536 AL445584.1-201ENST00000431451 330 ntBASIC2.58□□□□□ -2
TSPOP30536 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.58□□□□□ -2
TSPOP30536 KCTD10P1-201ENST00000434203 625 ntBASIC2.58□□□□□ -2
TSPOP30536 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.58□□□□□ -2
TSPOP30536 AC008264.1-201ENST00000447612 367 ntBASIC2.58□□□□□ -2
TSPOP30536 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.58□□□□□ -2
TSPOP30536 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.58□□□□□ -2
TSPOP30536 AC097262.1-201ENST00000452559 548 ntBASIC2.58□□□□□ -2
TSPOP30536 CENPBD1P1-201ENST00000464061 469 ntBASIC2.58□□□□□ -2
TSPOP30536 OR5H3P-201ENST00000502817 919 ntBASIC2.58□□□□□ -2
TSPOP30536 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.58□□□□□ -2
TSPOP30536 RNU1-95P-201ENST00000516357 160 ntBASIC2.58□□□□□ -2
TSPOP30536 RNU1-128P-201ENST00000516704 160 ntBASIC2.58□□□□□ -2
TSPOP30536 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.58□□□□□ -2
TSPOP30536 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.58□□□□□ -2
TSPOP30536 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.58□□□□□ -2
TSPOP30536 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.58□□□□□ -2
TSPOP30536 AL391156.1-201ENST00000554965 554 ntBASIC2.58□□□□□ -2
TSPOP30536 MTCO3P24-201ENST00000572729 782 ntBASIC2.58□□□□□ -2
TSPOP30536 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.58□□□□□ -2
TSPOP30536 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.58□□□□□ -2
TSPOP30536 AP004247.3-201ENST00000608682 624 ntBASIC2.58□□□□□ -2
TSPOP30536 AL355810.1-201ENST00000614629 552 ntBASIC2.58□□□□□ -2
TSPOP30536 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.58□□□□□ -2
TSPOP30536 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.58□□□□□ -2
TSPOP30536 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TSPOP30536 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
TSPOP30536 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.58□□□□□ -2
TSPOP30536 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.58□□□□□ -2
TSPOP30536 AC032011.1-201ENST00000611703 1549 ntBASIC2.58□□□□□ -2
TSPOP30536 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.57□□□□□ -2
TSPOP30536 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.57□□□□□ -2
TSPOP30536 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
TSPOP30536 FRG1CP-201ENST00000358464 769 ntBASIC2.57□□□□□ -2
TSPOP30536 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
TSPOP30536 RNU6-730P-201ENST00000383954 104 ntBASIC2.57□□□□□ -2
TSPOP30536 RSL24D1P1-201ENST00000404972 493 ntBASIC2.57□□□□□ -2
TSPOP30536 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.57□□□□□ -2
TSPOP30536 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.57□□□□□ -2
TSPOP30536 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.57□□□□□ -2
TSPOP30536 MTATP6P4-201ENST00000427725 675 ntBASIC2.57□□□□□ -2
TSPOP30536 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.57□□□□□ -2
TSPOP30536 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.57□□□□□ -2
TSPOP30536 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.57□□□□□ -2
TSPOP30536 MTCYBP34-201ENST00000439552 670 ntBASIC2.57□□□□□ -2
TSPOP30536 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.57□□□□□ -2
TSPOP30536 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.57□□□□□ -2
TSPOP30536 RN7SL75P-201ENST00000461926 281 ntBASIC2.57□□□□□ -2
TSPOP30536 AC068724.1-201ENST00000487100 792 ntBASIC2.57□□□□□ -2
TSPOP30536 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.57□□□□□ -2
TSPOP30536 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.57□□□□□ -2
TSPOP30536 SNORA31.1-201ENST00000515993 133 ntBASIC2.57□□□□□ -2
TSPOP30536 SNORA31.5-201ENST00000516190 133 ntBASIC2.57□□□□□ -2
TSPOP30536 SNORA48.9-201ENST00000516419 162 ntBASIC2.57□□□□□ -2
TSPOP30536 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.57□□□□□ -2
TSPOP30536 ERHP1-201ENST00000523006 310 ntBASIC2.57□□□□□ -2
TSPOP30536 AC124293.1-201ENST00000530034 493 ntBASIC2.57□□□□□ -2
TSPOP30536 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.57□□□□□ -2
TSPOP30536 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
TSPOP30536 LSM6P2-201ENST00000552208 177 ntBASIC2.57□□□□□ -2
TSPOP30536 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.57□□□□□ -2
TSPOP30536 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.57□□□□□ -2
TSPOP30536 AL157394.1-201ENST00000562983 1224 ntBASIC2.57□□□□□ -2
TSPOP30536 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.57□□□□□ -2
TSPOP30536 AC006130.2-201ENST00000586202 326 ntBASIC2.57□□□□□ -2
TSPOP30536 AC078899.3-201ENST00000599065 212 ntBASIC2.57□□□□□ -2
TSPOP30536 AC009220.3-201ENST00000604318 586 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms