Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 U8.12-201ENST00000384701 133 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PTPN6P29350 RNA5SP171-201ENST00000391071 115 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.45□□□□□ -1.86
PTPN6P29350 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN6P29350 MTND4P3-201ENST00000417829 541 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 MTCO3P1-205ENST00000422088 832 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AL139247.1-201ENST00000422768 325 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 DPRXP1-201ENST00000426312 460 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AC018644.1-201ENST00000429934 551 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 ARF4P2-201ENST00000430209 526 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 MRPS18BP2-201ENST00000434310 759 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AL590103.1-201ENST00000434488 307 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN6P29350 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN6P29350 SLC31A1P1-201ENST00000451221 567 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 U8.18-201ENST00000459285 133 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 RPL6P9-201ENST00000466502 859 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 RN7SL330P-201ENST00000469709 307 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 VPS26AP1-201ENST00000483197 979 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 ACTG1P13-201ENST00000486987 1043 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 CAB39P1-201ENST00000502277 460 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 RNU6-579P-201ENST00000516879 102 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.45□□□□□ -1.86
PTPN6P29350 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PTPN6P29350 DEFB130C-202ENST00000530001 230 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 LRRC6P1-201ENST00000532188 885 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN6P29350 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN6P29350 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.45□□□□□ -1.86
PTPN6P29350 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.45□□□□□ -1.86
PTPN6P29350 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN6P29350 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.45□□□□□ -1.86
PTPN6P29350 TMF1P1-201ENST00000576058 373 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN6P29350 MIR4444-1-201ENST00000581696 74 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 MIR5187-201ENST00000583479 76 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 MIR4444-2-201ENST00000584390 74 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN6P29350 AC073387.2-201ENST00000604797 784 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AC092954.1-201ENST00000609121 445 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.45□□□□□ -1.86
PTPN6P29350 AC073968.1-201ENST00000618594 637 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AL049777.1-201ENST00000622740 518 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AL732618.1-201ENST00000623251 301 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN6P29350 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.45□□□□□ -1.86
PTPN6P29350 AC026634.1-201ENST00000634369 198 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AC013437.2-201ENST00000639587 677 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 AP000553.6-201ENST00000641242 118 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.45□□□□□ -1.86
PTPN6P29350 AC007656.2-201ENST00000624902 4547 ntBASIC3.45□□□□□ -1.86
PTPN6P29350 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PTPN6P29350 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN6P29350 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN6P29350 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
PTPN6P29350 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN6P29350 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN6P29350 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
PTPN6P29350 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.44□□□□□ -1.86
PTPN6P29350 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN6P29350 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PTPN6P29350 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN6P29350 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN6P29350 RNA5SP124-201ENST00000362739 110 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 MIR200C-201ENST00000384980 68 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 RNU6-1300P-201ENST00000391046 108 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 RPL7P60-201ENST00000397636 735 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 MTND4LP20-201ENST00000402379 270 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AL079342.2-201ENST00000403367 482 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AC092634.6-201ENST00000418558 192 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AIMP1P1-201ENST00000418670 937 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 KRR1P1-201ENST00000419430 803 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 C1DP1-201ENST00000426049 402 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 MTCO1P3-201ENST00000429327 192 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 MTCYBP31-201ENST00000438855 1122 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN6P29350 MTCO1P48-201ENST00000448024 1096 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 HMGB1P15-201ENST00000453854 435 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AC007967.1-201ENST00000455422 1159 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 ACTR3P3-201ENST00000480448 893 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN6P29350 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.44□□□□□ -1.86
PTPN6P29350 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN6P29350 SNORA48.10-201ENST00000516965 160 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.44□□□□□ -1.86
PTPN6P29350 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.44□□□□□ -1.86
PTPN6P29350 AL121766.1-201ENST00000547436 487 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AL121603.1-201ENST00000553815 142 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 TRAV15-201ENST00000556680 249 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 SULT1C2P1-202ENST00000562418 459 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.44□□□□□ -1.86
PTPN6P29350 MIR4474-201ENST00000579189 78 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AP001029.3-201ENST00000588063 596 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PTPN6P29350 AC128687.1-201ENST00000605304 619 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 RNVU1-4-201ENST00000612985 164 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 AL121772.2-201ENST00000614331 297 ntBASIC3.44□□□□□ -1.86
PTPN6P29350 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms