Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.93□□□□□ -1.46
ERCC3P19447 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.93□□□□□ -1.46
ERCC3P19447 MTND1P9-201ENST00000453775 944 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.93□□□□□ -1.46
ERCC3P19447 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.93□□□□□ -1.46
ERCC3P19447 AC069439.1-201ENST00000494739 167 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AC140172.1-201ENST00000502928 141 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.93□□□□□ -1.46
ERCC3P19447 AC108145.1-201ENST00000503770 153 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 FTH1P21-201ENST00000512179 511 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 OR7H2P-201ENST00000513483 306 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AC008694.2-201ENST00000517591 306 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 HMGN1P28-201ENST00000521340 364 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 OR4R1P-201ENST00000529879 463 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AP000857.1-201ENST00000532151 543 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AL512310.1-201ENST00000548639 172 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 OR4T1P-201ENST00000554933 911 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 OR4K8P-201ENST00000578842 1048 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 RPL26P30-202ENST00000602923 645 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AC115621.1-201ENST00000604653 858 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AC017083.3-201ENST00000609955 700 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.93□□□□□ -1.46
ERCC3P19447 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ERCC3P19447 AC009033.1-201ENST00000624279 431 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 MIR1321-201ENST00000637766 79 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ERCC3P19447 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.93□□□□□ -1.46
ERCC3P19447 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.93□□□□□ -1.46
ERCC3P19447 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.93□□□□□ -1.46
ERCC3P19447 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC3P19447 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ERCC3P19447 AL592437.2-201ENST00000421655 2434 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 AL672167.1-205ENST00000641112 3080 ntBASIC5.93□□□□□ -1.46
ERCC3P19447 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 Y_RNA.159-201ENST00000363674 87 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC068050.1-201ENST00000394891 380 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 GPS2P1-201ENST00000411761 986 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 UQCRBP1-201ENST00000421129 336 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AL109913.1-201ENST00000421173 514 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 RGS17P1-201ENST00000423358 553 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 PRPF38AP2-201ENST00000438179 851 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 RNU7-59P-201ENST00000459101 61 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 HMGB1P25-201ENST00000468402 607 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 RN7SL346P-201ENST00000491561 294 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 RN7SL244P-201ENST00000493405 297 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 COX6B1P5-201ENST00000509843 249 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC006427.1-201ENST00000514359 712 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 AL359212.1-201ENST00000556608 614 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 RPL21P12-201ENST00000559810 515 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AC034105.3-201ENST00000565294 442 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 RN7SL52P-201ENST00000584271 284 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 RN7SL722P-201ENST00000617780 284 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 RN7SL565P-201ENST00000618246 284 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 AL356585.4-201ENST00000623078 1229 ntBASIC5.92□□□□□ -1.46
ERCC3P19447 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
ERCC3P19447 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC3P19447 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ERCC3P19447 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC3P19447 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
ERCC3P19447 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
ERCC3P19447 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 OR52B1P-201ENST00000316506 909 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC3P19447 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ERCC3P19447 AC013442.1-201ENST00000397347 228 ntBASIC5.91□□□□□ -1.46
ERCC3P19447 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC3P19447 AMD1P2-201ENST00000412936 992 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms