Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.73□□□□□ -1.65
COL11A2P13942 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL11A2P13942 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 Z95327.2-201ENST00000414579 1873 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 RNU6-181P-201ENST00000363225 107 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 RNU1-33P-201ENST00000364249 162 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 SNORA3.3-201ENST00000408712 125 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC092745.2-202ENST00000411880 369 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 PTP4A1P1-201ENST00000420539 515 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 GLRXP1-201ENST00000423261 334 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC005300.1-201ENST00000428401 373 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 OR6C5P-201ENST00000452388 923 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 RPL23AP12-201ENST00000467573 473 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 GMPSP1-201ENST00000514075 579 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 RNA5SP208-201ENST00000516156 78 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC083923.1-201ENST00000523708 376 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 AL365503.1-201ENST00000605247 905 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AL589743.7-201ENST00000612637 233 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC007742.2-201ENST00000618226 398 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC012150.2-201ENST00000621300 544 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 LRRC77P-213ENST00000637727 880 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL11A2P13942 GVINP1-202ENST00000531871 7271 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
COL11A2P13942 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 RN7SKP226-201ENST00000364912 300 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 RPL7P30-201ENST00000420888 709 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC092427.1-201ENST00000439177 601 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 APOOP2-201ENST00000461561 539 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 OR5H5P-201ENST00000503164 928 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC104108.1-201ENST00000509930 412 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 RN7SKP298-201ENST00000515950 94 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 RNU1-103P-201ENST00000516502 125 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 RN7SKP244-201ENST00000516513 307 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.72□□□□□ -1.65
COL11A2P13942 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.72□□□□□ -1.65
COL11A2P13942 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.72□□□□□ -1.65
COL11A2P13942 AP004607.9-201ENST00000618202 316 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL11A2P13942 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.72□□□□□ -1.65
COL11A2P13942 AC007823.1-201ENST00000569932 1566 ntBASIC4.71□□□□□ -1.65
COL11A2P13942 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL11A2P13942 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL11A2P13942 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL11A2P13942 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.71□□□□□ -1.65
COL11A2P13942 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL11A2P13942 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A2P13942 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.71□□□□□ -1.66
COL11A2P13942 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.71□□□□□ -1.66
COL11A2P13942 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A2P13942 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A2P13942 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
COL11A2P13942 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.71□□□□□ -1.66
COL11A2P13942 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A2P13942 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
COL11A2P13942 AL354685.2-201ENST00000448218 1447 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 RNU4-76P-201ENST00000364509 141 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 RNU5A-6P-201ENST00000384136 116 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 HMGB3P18-201ENST00000406327 590 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 RN7SKP177-201ENST00000410567 355 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.71□□□□□ -1.66
COL11A2P13942 AL158156.1-201ENST00000422509 473 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 RWDD4P2-201ENST00000426392 563 ntBASIC4.71□□□□□ -1.66
COL11A2P13942 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms