Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP3P08254 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.26□□□□□ -1.73
MMP3P08254 GNRHR2P1-201ENST00000555315 631 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.26□□□□□ -1.73
MMP3P08254 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP3P08254 SNORD39.3-201ENST00000584451 71 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AP001981.2-201ENST00000603241 418 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AL158196.1-201ENST00000616786 434 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AL591424.2-201ENST00000617023 128 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC092140.2-201ENST00000618027 521 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AL357559.1-201ENST00000622228 274 ntBASIC4.26□□□□□ -1.73
MMP3P08254 Z69908.1-201ENST00000622603 247 ntBASIC4.26□□□□□ -1.73
MMP3P08254 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
MMP3P08254 AC026634.1-201ENST00000634369 198 ntBASIC4.26□□□□□ -1.73
MMP3P08254 AC021755.1-201ENST00000559747 1447 ntBASIC4.26□□□□□ -1.73
MMP3P08254 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.26□□□□□ -1.73
MMP3P08254 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.26□□□□□ -1.73
MMP3P08254 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.26□□□□□ -1.73
MMP3P08254 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
MMP3P08254 AC107081.3-201ENST00000612715 2034 ntBASIC4.26□□□□□ -1.73
MMP3P08254 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
MMP3P08254 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
MMP3P08254 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
MMP3P08254 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 AC018529.3-201ENST00000624212 2254 ntBASIC4.25□□□□□ -1.73
MMP3P08254 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
MMP3P08254 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 Y_RNA.51-201ENST00000362725 102 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
MMP3P08254 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 DBF4P1-201ENST00000412976 1892 ntBASIC4.25□□□□□ -1.73
MMP3P08254 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.25□□□□□ -1.73
MMP3P08254 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.25□□□□□ -1.73
MMP3P08254 HSPD1P21-201ENST00000436541 245 ntBASIC4.25□□□□□ -1.73
MMP3P08254 RPL12P46-201ENST00000436610 195 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AC239809.1-201ENST00000450470 217 ntBASIC4.25□□□□□ -1.73
MMP3P08254 RPL23AP35-201ENST00000451906 501 ntBASIC4.25□□□□□ -1.73
MMP3P08254 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.25□□□□□ -1.73
MMP3P08254 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 RPL30P6-201ENST00000475925 342 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AC072039.1-201ENST00000477611 581 ntBASIC4.25□□□□□ -1.73
MMP3P08254 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 RPL7P24-201ENST00000493052 752 ntBASIC4.25□□□□□ -1.73
MMP3P08254 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
MMP3P08254 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.25□□□□□ -1.73
MMP3P08254 AC112198.1-201ENST00000505369 1220 ntBASIC4.25□□□□□ -1.73
MMP3P08254 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.25□□□□□ -1.73
MMP3P08254 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
MMP3P08254 RNU6-678P-201ENST00000516832 109 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AC027309.2-201ENST00000520566 192 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AP000790.1-201ENST00000528891 737 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AL121766.1-201ENST00000547436 487 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.25□□□□□ -1.73
MMP3P08254 AC090502.2-201ENST00000549267 280 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 MIR3922-201ENST00000585192 84 ntBASIC4.25□□□□□ -1.73
MMP3P08254 NF1P5-201ENST00000588287 448 ntBASIC4.25□□□□□ -1.73
MMP3P08254 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 WISP1-OT1-201ENST00000602893 642 ntBASIC4.25□□□□□ -1.73
MMP3P08254 RNU1-30P-201ENST00000606575 163 ntBASIC4.25□□□□□ -1.73
MMP3P08254 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 AC116447.1-201ENST00000613153 453 ntBASIC4.25□□□□□ -1.73
MMP3P08254 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 AC098679.5-201ENST00000624394 571 ntBASIC4.25□□□□□ -1.73
MMP3P08254 AC092184.1-201ENST00000625042 715 ntBASIC4.25□□□□□ -1.73
MMP3P08254 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.25□□□□□ -1.73
MMP3P08254 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
MMP3P08254 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.25□□□□□ -1.73
MMP3P08254 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
MMP3P08254 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
MMP3P08254 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
MMP3P08254 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
MMP3P08254 RNU5A-2P-201ENST00000384337 116 ntBASIC4.24□□□□□ -1.73
MMP3P08254 MIR183-201ENST00000384958 110 ntBASIC4.24□□□□□ -1.73
MMP3P08254 RPL7P60-201ENST00000397636 735 ntBASIC4.24□□□□□ -1.73
MMP3P08254 AL031577.2-201ENST00000404133 280 ntBASIC4.24□□□□□ -1.73
MMP3P08254 RNU2-28P-201ENST00000410457 189 ntBASIC4.24□□□□□ -1.73
MMP3P08254 USP9YP33-201ENST00000412220 421 ntBASIC4.24□□□□□ -1.73
MMP3P08254 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.24□□□□□ -1.73
MMP3P08254 NPM1P11-201ENST00000417106 855 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms