Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC005005.2-201ENST00000420779 380 ntBASIC3.79□□□□□ -1.8
VTNP04004 TMSB4XP1-201ENST00000424567 135 ntBASIC3.79□□□□□ -1.8
VTNP04004 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 AC008065.1-201ENST00000428525 348 ntBASIC3.79□□□□□ -1.8
VTNP04004 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 AF228730.2-201ENST00000438784 848 ntBASIC3.79□□□□□ -1.8
VTNP04004 AC092393.1-201ENST00000439625 742 ntBASIC3.79□□□□□ -1.8
VTNP04004 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 NECAP1P2-201ENST00000455668 727 ntBASIC3.79□□□□□ -1.8
VTNP04004 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.79□□□□□ -1.8
VTNP04004 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.79□□□□□ -1.8
VTNP04004 AC005798.1-201ENST00000513715 387 ntBASIC3.79□□□□□ -1.8
VTNP04004 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.79□□□□□ -1.8
VTNP04004 HIGD1AP6-201ENST00000521833 279 ntBASIC3.79□□□□□ -1.8
VTNP04004 AP001207.1-201ENST00000524051 481 ntBASIC3.79□□□□□ -1.8
VTNP04004 OR5AP1P-201ENST00000529730 940 ntBASIC3.79□□□□□ -1.8
VTNP04004 PTP4A1P6-201ENST00000531034 478 ntBASIC3.79□□□□□ -1.8
VTNP04004 AP001317.1-201ENST00000531194 960 ntBASIC3.79□□□□□ -1.8
VTNP04004 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.79□□□□□ -1.8
VTNP04004 VN1R78P-201ENST00000597393 564 ntBASIC3.79□□□□□ -1.8
VTNP04004 CLIC4P2-201ENST00000601934 717 ntBASIC3.79□□□□□ -1.8
VTNP04004 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.79□□□□□ -1.8
VTNP04004 AC010680.3-201ENST00000604215 520 ntBASIC3.79□□□□□ -1.8
VTNP04004 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.79□□□□□ -1.8
VTNP04004 AC107952.2-201ENST00000606048 486 ntBASIC3.79□□□□□ -1.8
VTNP04004 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.79□□□□□ -1.8
VTNP04004 AL359535.1-201ENST00000612100 1087 ntBASIC3.79□□□□□ -1.8
VTNP04004 AL354976.1-201ENST00000613843 387 ntBASIC3.79□□□□□ -1.8
VTNP04004 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.79□□□□□ -1.8
VTNP04004 AC022509.4-201ENST00000621404 572 ntBASIC3.79□□□□□ -1.8
VTNP04004 AC103858.2-201ENST00000621471 543 ntBASIC3.79□□□□□ -1.8
VTNP04004 AL157770.1-201ENST00000623049 439 ntBASIC3.79□□□□□ -1.8
VTNP04004 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.79□□□□□ -1.8
VTNP04004 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VTNP04004 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.79□□□□□ -1.8
VTNP04004 NMD3P1-201ENST00000439704 1488 ntBASIC3.79□□□□□ -1.8
VTNP04004 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
VTNP04004 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTNP04004 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
VTNP04004 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTNP04004 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
VTNP04004 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
VTNP04004 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTNP04004 RNA5SP197-201ENST00000363357 119 ntBASIC3.78□□□□□ -1.8
VTNP04004 RNU4-28P-201ENST00000364739 141 ntBASIC3.78□□□□□ -1.8
VTNP04004 RNU6-283P-201ENST00000364788 107 ntBASIC3.78□□□□□ -1.8
VTNP04004 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VTNP04004 HSPD1P16-201ENST00000402302 394 ntBASIC3.78□□□□□ -1.8
VTNP04004 AL133264.1-201ENST00000407157 562 ntBASIC3.78□□□□□ -1.8
VTNP04004 RAC1P3-201ENST00000416129 580 ntBASIC3.78□□□□□ -1.8
VTNP04004 RPS24P7-201ENST00000416921 246 ntBASIC3.78□□□□□ -1.8
VTNP04004 MTCO2P21-201ENST00000419780 677 ntBASIC3.78□□□□□ -1.8
VTNP04004 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 RWDD4P2-201ENST00000426392 563 ntBASIC3.78□□□□□ -1.8
VTNP04004 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.78□□□□□ -1.8
VTNP04004 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.78□□□□□ -1.8
VTNP04004 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.78□□□□□ -1.8
VTNP04004 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 FGF7P5-201ENST00000441829 291 ntBASIC3.78□□□□□ -1.8
VTNP04004 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.78□□□□□ -1.8
VTNP04004 BTF3P5-201ENST00000457252 467 ntBASIC3.78□□□□□ -1.8
VTNP04004 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.78□□□□□ -1.8
VTNP04004 RNU6-885P-201ENST00000516607 104 ntBASIC3.78□□□□□ -1.8
VTNP04004 RN7SKP57-201ENST00000517248 293 ntBASIC3.78□□□□□ -1.8
VTNP04004 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
VTNP04004 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.78□□□□□ -1.8
VTNP04004 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
VTNP04004 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 DUXAP6-201ENST00000553858 601 ntBASIC3.78□□□□□ -1.8
VTNP04004 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.78□□□□□ -1.8
VTNP04004 AC099489.2-201ENST00000574976 260 ntBASIC3.78□□□□□ -1.8
VTNP04004 MIR4666A-201ENST00000580160 79 ntBASIC3.78□□□□□ -1.8
VTNP04004 AC020914.4-201ENST00000597690 277 ntBASIC3.78□□□□□ -1.8
VTNP04004 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.78□□□□□ -1.8
VTNP04004 HMGB1P50-201ENST00000605814 607 ntBASIC3.78□□□□□ -1.8
VTNP04004 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
VTNP04004 AP002791.1-201ENST00000623291 381 ntBASIC3.78□□□□□ -1.8
VTNP04004 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.78□□□□□ -1.8
VTNP04004 AC127502.3-201ENST00000636170 1206 ntBASIC3.78□□□□□ -1.8
VTNP04004 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VTNP04004 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VTNP04004 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.81
VTNP04004 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.77□□□□□ -1.81
VTNP04004 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTNP04004 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VTNP04004 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VTNP04004 ZNF33CP-201ENST00000432492 2030 ntBASIC3.77□□□□□ -1.81
VTNP04004 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.77□□□□□ -1.81
VTNP04004 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms