Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL591416.1-201ENST00000404015 867 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 RNU2-6P-201ENST00000411404 190 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AC007064.1-201ENST00000412238 351 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 MTCO2P17-201ENST00000424336 677 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC010881.1-201ENST00000433830 235 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AC244505.4-201ENST00000434905 287 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AL357520.1-201ENST00000441557 453 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 SSXP5-201ENST00000443473 287 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A1P02462 RN7SL283P-201ENST00000489055 303 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC112673.1-201ENST00000513168 575 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC107918.3-201ENST00000533272 382 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 MIR5092-201ENST00000583139 88 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AC069234.5-201ENST00000611056 416 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AL354950.1-201ENST00000614150 568 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AC004696.1-201ENST00000614345 607 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
COL4A1P02462 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A1P02462 AC026523.2-201ENST00000625039 7739 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL4A1P02462 SNORA64-201ENST00000384674 134 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 PTP4A1P5-201ENST00000420305 455 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 PTP4A1P7-201ENST00000423476 514 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A1P02462 RPL30P9-201ENST00000465586 330 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC135999.1-201ENST00000478962 479 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.88□□□□□ -1.95
COL4A1P02462 EEF1A1P37-201ENST00000522748 715 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A1P02462 AC025754.2-201ENST00000606491 432 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 XPOTP1-201ENST00000443317 2398 ntBASIC2.88□□□□□ -1.95
COL4A1P02462 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.88□□□□□ -1.95
COL4A1P02462 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A1P02462 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A1P02462 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A1P02462 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
COL4A1P02462 RNU6-673P-201ENST00000365084 104 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 MIR137-201ENST00000385223 102 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 AL513477.1-202ENST00000417061 214 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 AL034379.1-201ENST00000423216 253 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.87□□□□□ -1.95
COL4A1P02462 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.87□□□□□ -1.95
COL4A1P02462 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.87□□□□□ -1.95
COL4A1P02462 AL024509.2-201ENST00000493462 493 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.87□□□□□ -1.95
COL4A1P02462 MTCYBP19-201ENST00000517463 1124 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 AC009063.1-201ENST00000563342 702 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A1P02462 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 AL589935.2-201ENST00000616471 1231 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL4A1P02462 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
COL4A1P02462 NR1H5P-201ENST00000452683 1377 ntBASIC2.87□□□□□ -1.95
COL4A1P02462 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A1P02462 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.86□□□□□ -1.95
COL4A1P02462 Z99496.1-201ENST00000469424 1477 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A1P02462 SNORD114-1-201ENST00000362705 72 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.86□□□□□ -1.95
COL4A1P02462 RNU6-233P-201ENST00000410845 141 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2.86□□□□□ -1.95
COL4A1P02462 AC009969.1-201ENST00000438726 172 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 HMGB3P12-201ENST00000438745 556 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.86□□□□□ -1.95
COL4A1P02462 AL353705.4-201ENST00000449661 238 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.86□□□□□ -1.95
COL4A1P02462 AC108860.1-201ENST00000484521 383 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 RPL23AP49-201ENST00000492925 468 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 RPS27P27-201ENST00000498779 255 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 SEC11B-201ENST00000518383 499 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 PDCD5P1-201ENST00000543528 309 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 AC103710.3-201ENST00000608157 948 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 AL450326.2-201ENST00000421913 1962 ntBASIC2.86□□□□□ -1.95
COL4A1P02462 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
COL4A1P02462 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.85□□□□□ -1.95
COL4A1P02462 RNU6-984P-201ENST00000363236 109 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
COL4A1P02462 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A1P02462 AC106872.3-201ENST00000495104 446 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.85□□□□□ -1.95
COL4A1P02462 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC2.85□□□□□ -1.95
COL4A1P02462 MTHFD2P4-201ENST00000515074 1025 ntBASIC2.85□□□□□ -1.95
COL4A1P02462 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.85□□□□□ -1.95
COL4A1P02462 AC067747.1-201ENST00000608026 250 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms