Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNA5SP146-201ENST00000410743 123 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC069218.2-201ENST00000411665 344 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 NUP35P2-201ENST00000416748 943 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 MTCO2P5-201ENST00000422621 426 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 NPM1P34-201ENST00000428821 893 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 MRPS10P2-201ENST00000431226 381 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC093414.1-201ENST00000434712 514 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 MTND6P13-201ENST00000443510 523 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 ARL2BPP10-201ENST00000446487 531 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC002381.1-201ENST00000447049 280 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AP000542.1-201ENST00000448473 371 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 BX322784.1-201ENST00000455793 1077 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS4BO75351 AC010683.1-201ENST00000473673 378 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 ACTR3P3-201ENST00000480448 893 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS4BO75351 FAM172BP-201ENST00000487497 1089 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 RPL9P6-201ENST00000492764 598 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 MRPS33P2-201ENST00000507850 322 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS4BO75351 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 AC022483.1-201ENST00000514020 567 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AP003467.2-201ENST00000520175 319 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC022861.1-201ENST00000522981 663 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.54□□□□□ -1.68
VPS4BO75351 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AP001880.2-201ENST00000538233 448 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 AC124068.1-201ENST00000563131 678 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS4BO75351 MIR4716-201ENST00000579628 84 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS4BO75351 MIR4715-201ENST00000584117 79 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC091178.1-203ENST00000584586 279 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC103792.1-201ENST00000603591 919 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AL161729.4-201ENST00000604650 476 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC091979.2-201ENST00000607514 214 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC024941.1-201ENST00000612250 334 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC090517.2-201ENST00000614966 680 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 SEPT14P19-203ENST00000633205 211 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 CCT4P2-201ENST00000233836 1548 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 OR14L1P-202ENST00000641545 3009 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.54□□□□□ -1.68
VPS4BO75351 AP002001.2-201ENST00000529025 1469 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 SAGE2P-201ENST00000420011 2126 ntBASIC4.54□□□□□ -1.68
VPS4BO75351 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS4BO75351 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS4BO75351 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VPS4BO75351 AC011155.1-201ENST00000316512 456 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VPS4BO75351 RNA5SP388-201ENST00000362584 119 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
VPS4BO75351 RNU6-809P-201ENST00000384461 107 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 SNORA48.7-201ENST00000391302 135 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 MIR548F1-201ENST00000408667 84 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 MTCO1P17-201ENST00000411522 491 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS4BO75351 RPL31P2-201ENST00000413849 377 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 MTND1P23-201ENST00000416931 372 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 BX510359.2-201ENST00000417920 305 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 AC004690.1-201ENST00000418216 328 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 AL645608.4-201ENST00000423619 154 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 AC004975.1-201ENST00000428733 208 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS4BO75351 RPS20P1-201ENST00000434853 354 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 AC009961.2-201ENST00000435771 251 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 UBE2V1P8-201ENST00000437166 265 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 SKP1P1-201ENST00000438081 489 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4BO75351 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4BO75351 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4BO75351 RPS5P7-201ENST00000456664 608 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS4BO75351 MTCO1P42-201ENST00000457379 726 ntBASIC4.53□□□□□ -1.68
VPS4BO75351 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms