Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF40O75150 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF40O75150 AC006023.2-201ENST00000609916 167 ntBASIC6.73□□□□□ -1.33
RNF40O75150 AL359547.2-201ENST00000615810 418 ntBASIC6.73□□□□□ -1.33
RNF40O75150 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.73□□□□□ -1.33
RNF40O75150 AC073488.9-201ENST00000631601 754 ntBASIC6.73□□□□□ -1.33
RNF40O75150 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.73□□□□□ -1.33
RNF40O75150 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
RNF40O75150 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
RNF40O75150 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF40O75150 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 OR52B3P-201ENST00000314715 928 ntBASIC6.72□□□□□ -1.33
RNF40O75150 Y_RNA.122-201ENST00000363331 96 ntBASIC6.72□□□□□ -1.33
RNF40O75150 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RNF40O75150 RN7SKP296-201ENST00000411185 341 ntBASIC6.72□□□□□ -1.33
RNF40O75150 SYF2P2-201ENST00000417620 583 ntBASIC6.72□□□□□ -1.33
RNF40O75150 RPL23AP38-201ENST00000423801 469 ntBASIC6.72□□□□□ -1.33
RNF40O75150 PPIAP10-201ENST00000438675 458 ntBASIC6.72□□□□□ -1.33
RNF40O75150 AC018638.3-201ENST00000461273 132 ntBASIC6.72□□□□□ -1.33
RNF40O75150 AL136126.1-201ENST00000473603 402 ntBASIC6.72□□□□□ -1.33
RNF40O75150 AC084198.1-201ENST00000477747 402 ntBASIC6.72□□□□□ -1.33
RNF40O75150 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.72□□□□□ -1.33
RNF40O75150 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF40O75150 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.72□□□□□ -1.33
RNF40O75150 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF40O75150 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
RNF40O75150 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.72□□□□□ -1.33
RNF40O75150 AC073410.2-201ENST00000603240 332 ntBASIC6.72□□□□□ -1.33
RNF40O75150 AL355877.2-201ENST00000603670 358 ntBASIC6.72□□□□□ -1.33
RNF40O75150 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RNF40O75150 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.72□□□□□ -1.33
RNF40O75150 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RNF40O75150 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.71□□□□□ -1.33
RNF40O75150 EXOC5P1-201ENST00000510543 1969 ntBASIC6.71□□□□□ -1.33
RNF40O75150 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RNF40O75150 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RNF40O75150 AC025470.1-201ENST00000510053 2032 ntBASIC6.71□□□□□ -1.33
RNF40O75150 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.71□□□□□ -1.34
RNF40O75150 Y_RNA.277-201ENST00000364754 102 ntBASIC6.71□□□□□ -1.34
RNF40O75150 RNU6-596P-201ENST00000365395 98 ntBASIC6.71□□□□□ -1.34
RNF40O75150 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF40O75150 RNU6-214P-201ENST00000384130 107 ntBASIC6.71□□□□□ -1.34
RNF40O75150 RNU6-434P-201ENST00000384376 107 ntBASIC6.71□□□□□ -1.34
RNF40O75150 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.71□□□□□ -1.34
RNF40O75150 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 SNORA77.2-201ENST00000408571 112 ntBASIC6.71□□□□□ -1.34
RNF40O75150 RPL23AP60-201ENST00000450011 454 ntBASIC6.71□□□□□ -1.34
RNF40O75150 RPL36AP13-201ENST00000457490 317 ntBASIC6.71□□□□□ -1.34
RNF40O75150 RN7SL254P-201ENST00000460609 284 ntBASIC6.71□□□□□ -1.34
RNF40O75150 CR383656.1-201ENST00000484916 377 ntBASIC6.71□□□□□ -1.34
RNF40O75150 RPS23P5-201ENST00000495419 428 ntBASIC6.71□□□□□ -1.34
RNF40O75150 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 AC074198.2-201ENST00000508153 258 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AC008716.1-201ENST00000511084 513 ntBASIC6.71□□□□□ -1.34
RNF40O75150 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 CYCSP25-201ENST00000525280 316 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AP003396.4-201ENST00000527574 265 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AC087441.2-201ENST00000529141 262 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AP002392.1-201ENST00000537692 208 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AC022884.2-201ENST00000578535 580 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 AL138889.2-201ENST00000603883 242 ntBASIC6.71□□□□□ -1.34
RNF40O75150 AC124916.2-201ENST00000604416 224 ntBASIC6.71□□□□□ -1.34
RNF40O75150 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 AC024255.1-201ENST00000614376 102 ntBASIC6.71□□□□□ -1.34
RNF40O75150 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.71□□□□□ -1.34
RNF40O75150 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RNF40O75150 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.71□□□□□ -1.34
RNF40O75150 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.71□□□□□ -1.34
RNF40O75150 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RNF40O75150 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms