Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC009969.1-201ENST00000438726 172 ntBASIC3.9□□□□□ -1.78
BRD4O60885 NECAP1P2-201ENST00000455668 727 ntBASIC3.9□□□□□ -1.78
BRD4O60885 AC128713.1-201ENST00000471495 306 ntBASIC3.9□□□□□ -1.78
BRD4O60885 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.9□□□□□ -1.78
BRD4O60885 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
BRD4O60885 AL049874.4-201ENST00000557593 255 ntBASIC3.9□□□□□ -1.78
BRD4O60885 AC022079.2-201ENST00000619739 566 ntBASIC3.9□□□□□ -1.78
BRD4O60885 Z99129.2-201ENST00000619967 314 ntBASIC3.9□□□□□ -1.78
BRD4O60885 AC022509.4-201ENST00000621404 572 ntBASIC3.9□□□□□ -1.78
BRD4O60885 PLCE1P1-201ENST00000622094 305 ntBASIC3.9□□□□□ -1.78
BRD4O60885 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.9□□□□□ -1.78
BRD4O60885 U3.12-201ENST00000364498 214 ntBASIC3.89□□□□□ -1.79
BRD4O60885 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
BRD4O60885 MIR153-1-201ENST00000384914 90 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.89□□□□□ -1.79
BRD4O60885 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.89□□□□□ -1.79
BRD4O60885 AL592437.1-201ENST00000443781 492 ntBASIC3.89□□□□□ -1.79
BRD4O60885 SNORD109B-201ENST00000458961 67 ntBASIC3.89□□□□□ -1.79
BRD4O60885 SNORD109A-201ENST00000459128 67 ntBASIC3.89□□□□□ -1.79
BRD4O60885 Y_RNA.638-201ENST00000459374 113 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC078918.1-201ENST00000498515 228 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC006445.2-201ENST00000510061 472 ntBASIC3.89□□□□□ -1.79
BRD4O60885 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.89□□□□□ -1.79
BRD4O60885 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.89□□□□□ -1.79
BRD4O60885 TRAV37-201ENST00000553906 342 ntBASIC3.89□□□□□ -1.79
BRD4O60885 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.89□□□□□ -1.79
BRD4O60885 AC016252.1-201ENST00000609721 474 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC090115.4-201ENST00000609970 188 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC005156.1-201ENST00000613371 573 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC121761.2-201ENST00000617300 689 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AL355493.4-201ENST00000618530 292 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.89□□□□□ -1.79
BRD4O60885 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.89□□□□□ -1.79
BRD4O60885 AL021368.2-201ENST00000606125 5352 ntBASIC3.89□□□□□ -1.79
BRD4O60885 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
BRD4O60885 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
BRD4O60885 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
BRD4O60885 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.89□□□□□ -1.79
BRD4O60885 AC007256.1-201ENST00000392253 2765 ntBASIC3.89□□□□□ -1.79
BRD4O60885 SNORA51.4-201ENST00000364993 124 ntBASIC3.89□□□□□ -1.79
BRD4O60885 SNORA70B-201ENST00000384210 135 ntBASIC3.89□□□□□ -1.79
BRD4O60885 MIR34A-201ENST00000385130 110 ntBASIC3.89□□□□□ -1.79
BRD4O60885 RNA5SP508-201ENST00000411327 119 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC146507.1-201ENST00000468335 354 ntBASIC3.89□□□□□ -1.79
BRD4O60885 TRBV12-1-201ENST00000479785 344 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC092185.1-201ENST00000491371 97 ntBASIC3.89□□□□□ -1.79
BRD4O60885 AC147055.1-201ENST00000509261 750 ntBASIC3.89□□□□□ -1.79
BRD4O60885 RNU4-29P-201ENST00000515943 174 ntBASIC3.89□□□□□ -1.79
BRD4O60885 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BRD4O60885 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.89□□□□□ -1.79
BRD4O60885 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.89□□□□□ -1.79
BRD4O60885 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
BRD4O60885 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.88□□□□□ -1.79
BRD4O60885 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
BRD4O60885 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.88□□□□□ -1.79
BRD4O60885 XGY1-201ENST00000381172 446 ntBASIC3.88□□□□□ -1.79
BRD4O60885 RNU6-356P-201ENST00000384140 107 ntBASIC3.88□□□□□ -1.79
BRD4O60885 MIR320B1-201ENST00000390209 79 ntBASIC3.88□□□□□ -1.79
BRD4O60885 GSTA12P-201ENST00000402398 508 ntBASIC3.88□□□□□ -1.79
BRD4O60885 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.88□□□□□ -1.79
BRD4O60885 AC007563.3-201ENST00000433233 371 ntBASIC3.88□□□□□ -1.79
BRD4O60885 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.88□□□□□ -1.79
BRD4O60885 PTGES3P5-201ENST00000455109 434 ntBASIC3.88□□□□□ -1.79
BRD4O60885 RPS3P1-201ENST00000456781 192 ntBASIC3.88□□□□□ -1.79
BRD4O60885 AP002884.2-201ENST00000471647 395 ntBASIC3.88□□□□□ -1.79
BRD4O60885 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.88□□□□□ -1.79
BRD4O60885 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.88□□□□□ -1.79
BRD4O60885 AL020991.1-201ENST00000612314 373 ntBASIC3.88□□□□□ -1.79
BRD4O60885 AC116563.2-201ENST00000624751 535 ntBASIC3.88□□□□□ -1.79
BRD4O60885 AC092159.4-201ENST00000624944 550 ntBASIC3.88□□□□□ -1.79
BRD4O60885 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.88□□□□□ -1.79
BRD4O60885 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
BRD4O60885 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
BRD4O60885 AL049780.3-201ENST00000624612 1583 ntBASIC3.87□□□□□ -1.79
BRD4O60885 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.87□□□□□ -1.79
BRD4O60885 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BRD4O60885 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.87□□□□□ -1.79
BRD4O60885 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
BRD4O60885 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BRD4O60885 MIR512-1-201ENST00000384913 84 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AL590004.2-201ENST00000404787 371 ntBASIC3.87□□□□□ -1.79
BRD4O60885 NPM1P11-201ENST00000417106 855 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AL356806.1-201ENST00000422524 916 ntBASIC3.87□□□□□ -1.79
BRD4O60885 RPS20P5-201ENST00000434808 360 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AL662791.1-201ENST00000441992 928 ntBASIC3.87□□□□□ -1.79
BRD4O60885 FDX1P2-201ENST00000450769 375 ntBASIC3.87□□□□□ -1.79
BRD4O60885 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.87□□□□□ -1.79
BRD4O60885 RNU7-27P-201ENST00000459281 62 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.87□□□□□ -1.79
BRD4O60885 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.87□□□□□ -1.79
BRD4O60885 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
BRD4O60885 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.87□□□□□ -1.79
BRD4O60885 PTP4A1P6-201ENST00000531034 478 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.87□□□□□ -1.79
BRD4O60885 AC009097.3-201ENST00000563557 1018 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AC010735.1-201ENST00000567305 1026 ntBASIC3.87□□□□□ -1.79
BRD4O60885 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.87□□□□□ -1.79
BRD4O60885 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BRD4O60885 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BRD4O60885 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms