Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA3O60609 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA3O60609 LINC02179-201ENST00000561523 3673 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
GFRA3O60609 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
GFRA3O60609 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.1□□□□□ -1.43
GFRA3O60609 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 NBPF8-201ENST00000583271 5330 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
GFRA3O60609 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA3O60609 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
GFRA3O60609 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA3O60609 AC079809.1-201ENST00000415468 276 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AL390729.2-201ENST00000416137 156 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 RPL30P13-201ENST00000418873 348 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 DUTP4-201ENST00000424782 475 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AL662874.1-201ENST00000426065 230 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 CRYGGP-201ENST00000443337 145 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 RPS15AP1-201ENST00000457423 391 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.09□□□□□ -1.43
GFRA3O60609 SNORA25.12-201ENST00000516202 82 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AC069113.1-201ENST00000517763 267 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 MIR4330-201ENST00000579077 105 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.09□□□□□ -1.43
GFRA3O60609 AC087575.1-201ENST00000585087 229 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.09□□□□□ -1.43
GFRA3O60609 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC6.09□□□□□ -1.43
GFRA3O60609 AL022394.1-201ENST00000606979 292 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AC023813.4-201ENST00000607580 580 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 AL136131.3-201ENST00000607600 188 ntBASIC6.09□□□□□ -1.43
GFRA3O60609 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
GFRA3O60609 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.09□□□□□ -1.43
GFRA3O60609 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
GFRA3O60609 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC6.09□□□□□ -1.43
GFRA3O60609 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
GFRA3O60609 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
GFRA3O60609 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
GFRA3O60609 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA3O60609 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
GFRA3O60609 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 AC074141.1-201ENST00000588129 2995 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA3O60609 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 SNORA62.2-201ENST00000364672 152 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 RNU6-715P-201ENST00000365204 103 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA3O60609 SEPT7P4-201ENST00000437076 306 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 RPL23AP74-201ENST00000437246 471 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.08□□□□□ -1.44
GFRA3O60609 AC005798.1-201ENST00000513715 387 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 RANP3-201ENST00000530970 276 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC6.08□□□□□ -1.44
GFRA3O60609 AL049872.1-201ENST00000556323 322 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.08□□□□□ -1.44
GFRA3O60609 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.08□□□□□ -1.44
GFRA3O60609 AC090525.3-201ENST00000605601 189 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 AC107294.1-201ENST00000609524 467 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 AC073349.3-201ENST00000617616 186 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 CU639417.4-201ENST00000623928 207 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 AC243829.7-201ENST00000633081 225 ntBASIC6.08□□□□□ -1.44
GFRA3O60609 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.08□□□□□ -1.44
GFRA3O60609 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
GFRA3O60609 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
GFRA3O60609 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC6.08□□□□□ -1.44
GFRA3O60609 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.07□□□□□ -1.44
GFRA3O60609 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
GFRA3O60609 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
GFRA3O60609 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
GFRA3O60609 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms