Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
GMDSO60547 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.96□□□□□ -1.94
GMDSO60547 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.96□□□□□ -1.94
GMDSO60547 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
GMDSO60547 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.95□□□□□ -1.94
GMDSO60547 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
GMDSO60547 RNU1-85P-201ENST00000364127 164 ntBASIC2.95□□□□□ -1.94
GMDSO60547 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
GMDSO60547 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
GMDSO60547 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
GMDSO60547 RPL21P3-201ENST00000395517 478 ntBASIC2.95□□□□□ -1.94
GMDSO60547 RPS29P4-201ENST00000414733 161 ntBASIC2.95□□□□□ -1.94
GMDSO60547 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.95□□□□□ -1.94
GMDSO60547 RPL21P32-201ENST00000419877 477 ntBASIC2.95□□□□□ -1.94
GMDSO60547 RPL21P40-201ENST00000428586 483 ntBASIC2.95□□□□□ -1.94
GMDSO60547 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.95□□□□□ -1.94
GMDSO60547 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.95□□□□□ -1.94
GMDSO60547 AC122718.1-201ENST00000439448 744 ntBASIC2.95□□□□□ -1.94
GMDSO60547 RPL36AP33-201ENST00000450395 310 ntBASIC2.95□□□□□ -1.94
GMDSO60547 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.95□□□□□ -1.94
GMDSO60547 AC097262.1-201ENST00000452559 548 ntBASIC2.95□□□□□ -1.94
GMDSO60547 FAM133DP-201ENST00000464802 691 ntBASIC2.95□□□□□ -1.94
GMDSO60547 AL672167.3-201ENST00000465951 960 ntBASIC2.95□□□□□ -1.94
GMDSO60547 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
GMDSO60547 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.95□□□□□ -1.94
GMDSO60547 AC108043.1-201ENST00000512696 574 ntBASIC2.95□□□□□ -1.94
GMDSO60547 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.95□□□□□ -1.94
GMDSO60547 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.95□□□□□ -1.94
GMDSO60547 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.95□□□□□ -1.94
GMDSO60547 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.95□□□□□ -1.94
GMDSO60547 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.95□□□□□ -1.94
GMDSO60547 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.95□□□□□ -1.94
GMDSO60547 AC074051.3-201ENST00000570238 358 ntBASIC2.95□□□□□ -1.94
GMDSO60547 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.95□□□□□ -1.94
GMDSO60547 AC067852.3-201ENST00000589177 561 ntBASIC2.95□□□□□ -1.94
GMDSO60547 KATNBL1P1-201ENST00000605192 748 ntBASIC2.95□□□□□ -1.94
GMDSO60547 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.95□□□□□ -1.94
GMDSO60547 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.95□□□□□ -1.94
GMDSO60547 AC073348.1-201ENST00000623002 331 ntBASIC2.95□□□□□ -1.94
GMDSO60547 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
GMDSO60547 AC025263.3-201ENST00000622965 1396 ntBASIC2.95□□□□□ -1.94
GMDSO60547 AC017071.1-201ENST00000564407 2204 ntBASIC2.95□□□□□ -1.94
GMDSO60547 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 RNU6-1249P-201ENST00000363237 111 ntBASIC2.94□□□□□ -1.94
GMDSO60547 U3.11-201ENST00000364476 212 ntBASIC2.94□□□□□ -1.94
GMDSO60547 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.94□□□□□ -1.94
GMDSO60547 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
GMDSO60547 AL356057.1-202ENST00000402263 756 ntBASIC2.94□□□□□ -1.94
GMDSO60547 RNU6-1077P-201ENST00000410506 102 ntBASIC2.94□□□□□ -1.94
GMDSO60547 Z99755.1-201ENST00000414048 380 ntBASIC2.94□□□□□ -1.94
GMDSO60547 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.94□□□□□ -1.94
GMDSO60547 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 BX842559.1-201ENST00000419615 532 ntBASIC2.94□□□□□ -1.94
GMDSO60547 PAICSP7-201ENST00000419829 962 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AC006960.1-201ENST00000419980 153 ntBASIC2.94□□□□□ -1.94
GMDSO60547 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.94□□□□□ -1.94
GMDSO60547 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.94□□□□□ -1.94
GMDSO60547 AL050321.1-201ENST00000432363 400 ntBASIC2.94□□□□□ -1.94
GMDSO60547 HMGB3P11-201ENST00000440127 604 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AC092170.1-201ENST00000440211 356 ntBASIC2.94□□□□□ -1.94
GMDSO60547 RAB11AP1-201ENST00000442978 646 ntBASIC2.94□□□□□ -1.94
GMDSO60547 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC2.94□□□□□ -1.94
GMDSO60547 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.94□□□□□ -1.94
GMDSO60547 AC008264.1-201ENST00000447612 367 ntBASIC2.94□□□□□ -1.94
GMDSO60547 PDSS1P2-201ENST00000449397 678 ntBASIC2.94□□□□□ -1.94
GMDSO60547 MTND3P4-201ENST00000453537 303 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.94□□□□□ -1.94
GMDSO60547 AL590639.1-201ENST00000456484 337 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AC006499.5-201ENST00000505037 514 ntBASIC2.94□□□□□ -1.94
GMDSO60547 FCF1P8-201ENST00000510322 597 ntBASIC2.94□□□□□ -1.94
GMDSO60547 MTCO3P44-201ENST00000510977 541 ntBASIC2.94□□□□□ -1.94
GMDSO60547 RNU1-143P-201ENST00000516296 146 ntBASIC2.94□□□□□ -1.94
GMDSO60547 SCARNA20.6-201ENST00000517251 106 ntBASIC2.94□□□□□ -1.94
GMDSO60547 OR8I1P-201ENST00000529291 931 ntBASIC2.94□□□□□ -1.94
GMDSO60547 OR5B10P-201ENST00000532869 642 ntBASIC2.94□□□□□ -1.94
GMDSO60547 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.94□□□□□ -1.94
GMDSO60547 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.94□□□□□ -1.94
GMDSO60547 AL627309.6-201ENST00000606857 840 ntBASIC2.94□□□□□ -1.94
GMDSO60547 U1.23-201ENST00000610293 146 ntBASIC2.94□□□□□ -1.94
GMDSO60547 RNU1-68P-201ENST00000615382 146 ntBASIC2.94□□□□□ -1.94
GMDSO60547 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.94□□□□□ -1.94
GMDSO60547 U1.39-201ENST00000621562 146 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AC006111.3-201ENST00000622137 383 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AL161637.1-201ENST00000622380 412 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AL356490.1-201ENST00000623079 479 ntBASIC2.94□□□□□ -1.94
GMDSO60547 LRRC77P-213ENST00000637727 880 ntBASIC2.94□□□□□ -1.94
GMDSO60547 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 MTND5P31-201ENST00000419366 1374 ntBASIC2.94□□□□□ -1.94
GMDSO60547 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 AL645937.1-201ENST00000641739 1652 ntBASIC2.94□□□□□ -1.94
GMDSO60547 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
GMDSO60547 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
GMDSO60547 AL645568.2-201ENST00000432815 1337 ntBASIC2.93□□□□□ -1.94
GMDSO60547 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
GMDSO60547 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms