Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.4□□□□□ -1.87
LCMT2O60294 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.4□□□□□ -1.87
LCMT2O60294 AC006116.10-201ENST00000591836 581 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 AC245884.10-201ENST00000597355 337 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC009237.15-201ENST00000610252 501 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AL590282.1-201ENST00000610379 1136 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC016597.2-201ENST00000613256 341 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC090116.1-201ENST00000615679 446 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 AC068722.2-201ENST00000618734 544 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.4□□□□□ -1.87
LCMT2O60294 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LCMT2O60294 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.4□□□□□ -1.87
LCMT2O60294 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 FRG1CP-201ENST00000358464 769 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 RNU6-582P-201ENST00000362989 107 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 SNORA62.3-201ENST00000365110 153 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LCMT2O60294 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 RNU6-224P-201ENST00000384055 107 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 MIR217-201ENST00000384817 110 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 ATP5F1P3-201ENST00000397213 657 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AL079342.2-201ENST00000403367 482 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AP000567.1-201ENST00000406413 156 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 RN7SKP53-201ENST00000411337 315 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC007390.1-201ENST00000415722 356 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 ARF4P2-201ENST00000430209 526 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 HSPD1P21-201ENST00000436541 245 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC004854.1-201ENST00000440356 349 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 SNORD105B-201ENST00000458770 79 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 U3.44-201ENST00000458938 192 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 RN7SL330P-201ENST00000469709 307 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC010285.1-201ENST00000470580 392 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AL049830.2-201ENST00000480072 201 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 HMGB1P22-201ENST00000505315 124 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC026403.1-201ENST00000518938 295 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AP006245.1-201ENST00000522549 120 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.39□□□□□ -1.87
LCMT2O60294 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 AL592148.2-201ENST00000612210 372 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 RNVU1-4-201ENST00000612985 164 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 AC123767.1-202ENST00000620407 817 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC034229.5-201ENST00000624258 185 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LCMT2O60294 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.39□□□□□ -1.87
LCMT2O60294 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
LCMT2O60294 AC117529.2-201ENST00000512159 2068 ntBASIC3.39□□□□□ -1.87
LCMT2O60294 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 RNU6-839P-201ENST00000363347 108 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 RNU6-707P-201ENST00000364647 95 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
LCMT2O60294 AL139098.1-201ENST00000407291 389 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LCMT2O60294 MTND2P9-201ENST00000422293 931 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 RAC1P8-201ENST00000427086 527 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 Z93242.1-201ENST00000427102 353 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 B3GNT2P1-201ENST00000434960 952 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.38□□□□□ -1.87
LCMT2O60294 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.38□□□□□ -1.87
LCMT2O60294 AC104073.1-201ENST00000451988 151 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC073387.1-201ENST00000453261 709 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.38□□□□□ -1.87
LCMT2O60294 snoU13.24-201ENST00000458998 104 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 RPL7P15-201ENST00000461190 712 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 RPL21P104-201ENST00000464143 478 ntBASIC3.38□□□□□ -1.87
LCMT2O60294 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.38□□□□□ -1.87
LCMT2O60294 DYNLL1P6-201ENST00000503440 264 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms