Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.11□□□□□ -1.91
COCHO43405 FABP5P6-201ENST00000510588 409 ntBASIC3.11□□□□□ -1.91
COCHO43405 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.11□□□□□ -1.91
COCHO43405 AL133393.1-201ENST00000603277 287 ntBASIC3.11□□□□□ -1.91
COCHO43405 AC024023.1-201ENST00000624530 922 ntBASIC3.11□□□□□ -1.91
COCHO43405 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
COCHO43405 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COCHO43405 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
COCHO43405 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
COCHO43405 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COCHO43405 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
COCHO43405 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COCHO43405 RNU6-50P-201ENST00000362356 103 ntBASIC3.1□□□□□ -1.91
COCHO43405 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 DEFB109C-201ENST00000382575 264 ntBASIC3.1□□□□□ -1.91
COCHO43405 DEFB109B-201ENST00000382656 264 ntBASIC3.1□□□□□ -1.91
COCHO43405 AL354719.1-201ENST00000406535 843 ntBASIC3.1□□□□□ -1.91
COCHO43405 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
COCHO43405 RPL7P8-201ENST00000411964 730 ntBASIC3.1□□□□□ -1.91
COCHO43405 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 RPS7P13-201ENST00000413955 498 ntBASIC3.1□□□□□ -1.91
COCHO43405 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
COCHO43405 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.1□□□□□ -1.91
COCHO43405 HMGB3P6-201ENST00000444896 598 ntBASIC3.1□□□□□ -1.91
COCHO43405 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.1□□□□□ -1.91
COCHO43405 RN7SL442P-201ENST00000473804 320 ntBASIC3.1□□□□□ -1.91
COCHO43405 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.1□□□□□ -1.91
COCHO43405 SUMO1P1-201ENST00000497904 306 ntBASIC3.1□□□□□ -1.91
COCHO43405 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 PRELID3BP6-201ENST00000503839 571 ntBASIC3.1□□□□□ -1.91
COCHO43405 AC098799.1-201ENST00000504752 800 ntBASIC3.1□□□□□ -1.91
COCHO43405 RNA5SP468-201ENST00000516782 93 ntBASIC3.1□□□□□ -1.91
COCHO43405 RN7SKP96-201ENST00000516948 297 ntBASIC3.1□□□□□ -1.91
COCHO43405 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.1□□□□□ -1.91
COCHO43405 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.1□□□□□ -1.91
COCHO43405 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.1□□□□□ -1.91
COCHO43405 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
COCHO43405 MIMT1-201ENST00000597105 1050 ntBASIC3.1□□□□□ -1.91
COCHO43405 YWHAQP7-201ENST00000603536 658 ntBASIC3.1□□□□□ -1.91
COCHO43405 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.1□□□□□ -1.91
COCHO43405 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COCHO43405 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
COCHO43405 AC117529.2-201ENST00000512159 2068 ntBASIC3.1□□□□□ -1.91
COCHO43405 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.09□□□□□ -1.91
COCHO43405 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
COCHO43405 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
COCHO43405 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
COCHO43405 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.09□□□□□ -1.91
COCHO43405 RNU1-101P-201ENST00000391171 127 ntBASIC3.09□□□□□ -1.91
COCHO43405 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.09□□□□□ -1.91
COCHO43405 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.09□□□□□ -1.91
COCHO43405 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.09□□□□□ -1.91
COCHO43405 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.09□□□□□ -1.91
COCHO43405 TRIM60P18-201ENST00000441518 828 ntBASIC3.09□□□□□ -1.91
COCHO43405 RPL37P4-201ENST00000448908 268 ntBASIC3.09□□□□□ -1.91
COCHO43405 Z99714.1-201ENST00000450463 807 ntBASIC3.09□□□□□ -1.91
COCHO43405 AC126121.1-201ENST00000482313 553 ntBASIC3.09□□□□□ -1.91
COCHO43405 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.09□□□□□ -1.91
COCHO43405 SNORD59.2-201ENST00000516873 68 ntBASIC3.09□□□□□ -1.91
COCHO43405 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.09□□□□□ -1.91
COCHO43405 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.09□□□□□ -1.91
COCHO43405 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.09□□□□□ -1.91
COCHO43405 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.09□□□□□ -1.91
COCHO43405 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.09□□□□□ -1.91
COCHO43405 AC007566.2-201ENST00000603642 413 ntBASIC3.09□□□□□ -1.91
COCHO43405 VIS1.1-201ENST00000610517 203 ntBASIC3.09□□□□□ -1.91
COCHO43405 AC006963.1-201ENST00000624003 1052 ntBASIC3.09□□□□□ -1.91
COCHO43405 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.09□□□□□ -1.91
COCHO43405 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.09□□□□□ -1.91
COCHO43405 ELL2P4-201ENST00000446870 1376 ntBASIC3.09□□□□□ -1.92
COCHO43405 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
COCHO43405 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
COCHO43405 FAM35CP-201ENST00000554755 2470 ntBASIC3.09□□□□□ -1.92
COCHO43405 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.09□□□□□ -1.92
COCHO43405 AC107081.3-201ENST00000612715 2034 ntBASIC3.09□□□□□ -1.92
COCHO43405 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.08□□□□□ -1.92
COCHO43405 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
COCHO43405 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
COCHO43405 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
COCHO43405 AC093908.1-201ENST00000623125 8092 ntBASIC3.08□□□□□ -1.92
COCHO43405 RNU6-819P-201ENST00000364116 107 ntBASIC3.08□□□□□ -1.92
COCHO43405 U3.11-201ENST00000364476 212 ntBASIC3.08□□□□□ -1.92
COCHO43405 RNU6-7-201ENST00000364784 107 ntBASIC3.08□□□□□ -1.92
COCHO43405 RNU6-8-201ENST00000365467 107 ntBASIC3.08□□□□□ -1.92
COCHO43405 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
COCHO43405 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
COCHO43405 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
COCHO43405 RNU4-65P-201ENST00000410473 140 ntBASIC3.08□□□□□ -1.92
COCHO43405 RNU6-564P-201ENST00000410983 104 ntBASIC3.08□□□□□ -1.92
COCHO43405 RNU4-74P-201ENST00000411280 161 ntBASIC3.08□□□□□ -1.92
COCHO43405 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.08□□□□□ -1.92
COCHO43405 AL445528.1-201ENST00000426330 420 ntBASIC3.08□□□□□ -1.92
COCHO43405 RPL17P49-201ENST00000443728 411 ntBASIC3.08□□□□□ -1.92
COCHO43405 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COCHO43405 RPL7P59-201ENST00000447700 943 ntBASIC3.08□□□□□ -1.92
COCHO43405 NPM1P13-201ENST00000452663 865 ntBASIC3.08□□□□□ -1.92
COCHO43405 RPS24P6-201ENST00000452670 400 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms