Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.38□□□□□ -2.03
SDCBPO00560 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.37□□□□□ -2.03
SDCBPO00560 SNORD46.1-201ENST00000364139 104 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 RNU6-851P-201ENST00000384565 107 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SDCBPO00560 AC010385.1-201ENST00000412374 256 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC105402.1-201ENST00000413336 545 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC234782.4-201ENST00000417646 1048 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 TOMM22P1-201ENST00000418578 312 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 RPS15AP40-201ENST00000419621 391 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AL451062.2-201ENST00000427515 271 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 SAR1AP4-201ENST00000429225 591 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 RPL21P112-201ENST00000434403 463 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 RPS20P5-201ENST00000434808 360 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 SETP8-201ENST00000435341 628 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 HMGN2P20-201ENST00000437531 273 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 HMGB1P12-201ENST00000438594 598 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC093156.1-201ENST00000440382 670 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 MRPL50P4-201ENST00000446432 475 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AL671855.1-201ENST00000446875 1203 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 Z99714.1-201ENST00000450463 807 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AP001992.1-205ENST00000462248 379 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 RPL21P8-201ENST00000465083 535 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC003982.1-202ENST00000469928 248 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 VN1R17P-201ENST00000472048 1090 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.37□□□□□ -2.03
SDCBPO00560 AC107398.1-201ENST00000486904 505 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC083906.5-201ENST00000503722 328 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.37□□□□□ -2.03
SDCBPO00560 AC005351.1-201ENST00000511152 786 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.37□□□□□ -2.03
SDCBPO00560 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.37□□□□□ -2.03
SDCBPO00560 MIR4474-201ENST00000579189 78 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 IGHV3-29-201ENST00000604817 344 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 AC007179.3-201ENST00000604976 235 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 BNIP3P7-201ENST00000605641 516 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 MIR4496-201ENST00000635896 61 ntBASIC2.37□□□□□ -2.03
SDCBPO00560 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.37□□□□□ -2.03
SDCBPO00560 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SDCBPO00560 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SDCBPO00560 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SDCBPO00560 SNORA7.2-201ENST00000364446 145 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
SDCBPO00560 RNU6-1293P-201ENST00000384077 107 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RNU6-452P-201ENST00000384406 107 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RNU6-564P-201ENST00000410983 104 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.36□□□□□ -2.03
SDCBPO00560 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.36□□□□□ -2.03
SDCBPO00560 LINC01881-201ENST00000416103 412 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 EI24P1-201ENST00000416584 867 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RPL21P2-201ENST00000440049 481 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.36□□□□□ -2.03
SDCBPO00560 TPTE2P6-202ENST00000445572 1007 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AL590399.6-201ENST00000446396 307 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.36□□□□□ -2.03
SDCBPO00560 BX276092.4-201ENST00000452056 248 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 NIPA2P5-201ENST00000452282 464 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AC017015.1-201ENST00000477387 286 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 CAB39P1-201ENST00000502277 460 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 PCNAP1-201ENST00000505363 709 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
SDCBPO00560 AC111000.2-201ENST00000507775 550 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 MTCO3P42-201ENST00000509488 518 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 MTCO3P39-201ENST00000514812 518 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RNA5SP341-201ENST00000516261 117 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RNU6-826P-201ENST00000516827 104 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AC104986.1-201ENST00000517978 436 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AP002812.4-201ENST00000532139 286 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.36□□□□□ -2.03
SDCBPO00560 AC010653.1-201ENST00000571108 881 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 MIR3605-201ENST00000583214 100 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SDCBPO00560 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
SDCBPO00560 AC096577.2-201ENST00000611455 153 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AL392048.1-201ENST00000613946 534 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AP004607.9-201ENST00000618202 316 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 MIR8057-201ENST00000620957 69 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 RNU6-156P-201ENST00000621869 107 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AC006111.3-201ENST00000622137 383 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 MIR3651-201ENST00000630427 90 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 MTND4P34-201ENST00000572715 1371 ntBASIC2.36□□□□□ -2.03
SDCBPO00560 AC096644.4-201ENST00000563417 2912 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SDCBPO00560 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SDCBPO00560 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SDCBPO00560 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SDCBPO00560 RNU6-152P-201ENST00000384037 107 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.35□□□□□ -2.03
SDCBPO00560 KRR1P1-201ENST00000419430 803 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
SDCBPO00560 AL606490.7-201ENST00000433136 191 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 RPL36AP6-201ENST00000435770 321 ntBASIC2.35□□□□□ -2.03
SDCBPO00560 RPL23AP74-201ENST00000437246 471 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms