Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRAV9-2A0A087WT02 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRAV9-2A0A087WT02 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRAV9-2A0A087WT02 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRAV9-2A0A087WT02 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRAV9-2A0A087WT02 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 OR5P1P-201ENST00000299512 925 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 Y_RNA.169-201ENST00000363745 96 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 SNORD82-201ENST00000365530 70 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 MT-TC-201ENST00000387405 66 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RPL31P1-201ENST00000398116 372 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC136624.1-201ENST00000400791 413 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL590704.1-201ENST00000402856 794 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RPS20P14-201ENST00000412545 360 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RPL7AP25-201ENST00000423357 805 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL049610.1-201ENST00000423374 372 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RNU7-136P-201ENST00000458819 69 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RN7SL303P-201ENST00000469773 251 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LINC00888-204ENST00000487386 421 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC013356.1-201ENST00000489027 564 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC090453.1-201ENST00000495560 436 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 ATP1B1P1-201ENST00000509767 915 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC093281.2-201ENST00000510153 597 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 MTND1P22-201ENST00000510572 951 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 IGLVIV-65-201ENST00000517313 360 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC007834.2-201ENST00000536310 343 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 OR7K1P-201ENST00000546439 926 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC007599.1-201ENST00000568688 1174 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC135628.1-201ENST00000568867 534 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 MAGOH2P-202ENST00000584384 429 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL596327.1-201ENST00000603629 213 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC112230.1-201ENST00000604342 547 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 RMST_8.1-201ENST00000610287 165 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC023043.4-201ENST00000612081 449 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AC231657.1-201ENST00000624313 397 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 MIR7153-201ENST00000637758 57 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 CEP170P1-201ENST00000502249 4587 ntBASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
TRAV9-2A0A087WT02 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.03□□□□□ -1.93
TRAV9-2A0A087WT02 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 NUP58P1-201ENST00000502546 1738 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 RNU6-989P-201ENST00000362756 107 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 RNU6-433P-201ENST00000363216 104 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 RNA5SP175-201ENST00000364275 119 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 SNORD116-8-201ENST00000384365 95 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 Y_RNA.493-201ENST00000384422 102 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 RNU6-328P-201ENST00000390887 106 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 RNU4-78P-201ENST00000410940 126 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 Y_RNA.625-201ENST00000411256 107 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 TPMTP2-201ENST00000414372 726 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 MTND2P18-201ENST00000419962 1030 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 USP9YP26-201ENST00000421008 661 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 ARF4P2-201ENST00000430209 526 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 ZYG11AP1-201ENST00000430329 837 ntBASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.02□□□□□ -1.93
TRAV9-2A0A087WT02 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms