Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TRAV27A0A087WT01 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
TRAV27A0A087WT01 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 SNORD21-201ENST00000383953 95 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 MIR887-201ENST00000401258 79 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 YPEL5P1-201ENST00000419731 367 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 CKS1BP5-201ENST00000434172 273 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 TPMTP4-201ENST00000450749 678 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 RN7SL499P-201ENST00000481141 276 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC090071.1-201ENST00000507713 644 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 SNORA26.10-201ENST00000516427 141 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 SEC11B-201ENST00000518383 499 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC008083.2-201ENST00000546707 476 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC079600.2-201ENST00000550076 130 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC090616.5-202ENST00000582111 297 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 SNRPGP15-201ENST00000600149 222 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 HMGN2P28-201ENST00000606102 262 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC055764.2-201ENST00000610089 670 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AL390240.1-201ENST00000612950 384 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AL392048.1-201ENST00000613946 534 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC231759.1-201ENST00000616455 597 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 AC015726.3-201ENST00000624501 418 ntBASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
TRAV27A0A087WT01 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 TAB3P1-202ENST00000452645 1634 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC073346.2-201ENST00000624724 2058 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 SNORD65-201ENST00000391079 73 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 RNA5SP21-201ENST00000410917 96 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 RPS20P25-201ENST00000412447 352 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 MRPL50P2-201ENST00000416821 482 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC104332.2-201ENST00000429959 156 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 RPL23AP33-201ENST00000442301 452 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 COX6CP2-201ENST00000444980 225 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 CAB39P1-201ENST00000502277 460 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC007536.1-201ENST00000533382 349 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 OR7K1P-201ENST00000546439 926 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 CR383656.14-201ENST00000551951 406 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 MTCO2P22-201ENST00000603246 681 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 RPL23AP61-201ENST00000623642 466 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 ZNF807-201ENST00000328088 1707 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC092435.3-201ENST00000565538 3654 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 AC073055.1-201ENST00000456901 1621 ntBASIC2.39□□□□□ -2.03
TRAV27A0A087WT01 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC011978.2-201ENST00000569835 2054 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 MTCO1P8-201ENST00000416914 1523 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 RNU6-666P-201ENST00000363499 107 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 RNU6-244P-201ENST00000391028 104 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AL356057.3-201ENST00000402607 340 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC244098.2-201ENST00000422068 99 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AL451062.2-201ENST00000427515 271 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC023347.2-201ENST00000433994 462 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 NECAP1P2-201ENST00000455668 727 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 S100A11P2-201ENST00000467589 312 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC026427.2-201ENST00000506228 536 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 ARL4AP2-201ENST00000507378 601 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 SNORD59.2-201ENST00000516873 68 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 SNORA31.21-201ENST00000517180 77 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC123904.3-201ENST00000547218 814 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC096947.1-201ENST00000603233 470 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 AC093732.2-201ENST00000607950 274 ntBASIC2.38□□□□□ -2.03
TRAV27A0A087WT01 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms