Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AL133507.1-201ENST00000605269 557 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 AC124312.4-201ENST00000605533 310 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 AC084036.1-201ENST00000609190 508 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 AC104237.2-201ENST00000612456 443 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 AC026422.1-201ENST00000623961 452 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.24□□□□□ -2.05
TRAV30A0A087WSZ9 MTND5P1-201ENST00000445440 1375 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 MIR592-201ENST00000384959 97 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AL512633.1-201ENST00000399931 655 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 LINC01881-201ENST00000416103 412 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 MTATP6P4-201ENST00000427725 675 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 YME1L1P1-201ENST00000429435 297 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 PTP4A1P3-201ENST00000433661 420 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 ELOCP11-201ENST00000436690 332 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AL513043.1-201ENST00000439124 535 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 ELOCP16-201ENST00000444494 332 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 RPL6P5-201ENST00000445678 828 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 OR51B8P-201ENST00000449892 769 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC234775.1-201ENST00000454247 670 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC017015.1-201ENST00000477387 286 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC006445.1-201ENST00000491925 405 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 SNORA31.1-201ENST00000515993 133 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 SNORA31.5-201ENST00000516190 133 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC009812.2-201ENST00000517657 457 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC128657.1-201ENST00000549459 145 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC006539.2-201ENST00000601729 572 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC024560.3-201ENST00000608482 349 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AC007275.1-201ENST00000621243 671 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AL512283.1-201ENST00000606756 1384 ntBASIC2.23□□□□□ -2.05
TRAV30A0A087WSZ9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 RNU6-50P-201ENST00000362356 103 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 RNU6-799P-201ENST00000363567 107 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 SNORA54-201ENST00000384281 123 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 FABP12P1-201ENST00000401911 322 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 RNU4-65P-201ENST00000410473 140 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC092017.2-201ENST00000427600 362 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 FTH1P2-201ENST00000466086 412 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 RN7SL504P-201ENST00000494496 287 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 HMGB1P23-201ENST00000518743 568 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AP000857.1-201ENST00000532151 543 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 OSBPL9P3-201ENST00000534523 595 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC022884.3-201ENST00000579571 248 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC020895.1-201ENST00000595362 272 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC007566.2-201ENST00000603642 413 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AL713998.2-201ENST00000604538 1198 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 IGHV3-29-201ENST00000604817 344 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC008277.2-201ENST00000605196 797 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 AC007342.8-201ENST00000623278 678 ntBASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV30A0A087WSZ9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
TRAV30A0A087WSZ9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms