Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 Y_RNA.488-201ENST00000384403 102 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 SNORA69.1-201ENST00000390904 137 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 RNU6-918P-201ENST00000391219 106 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 RNU2-52P-201ENST00000410680 190 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 TRAPPC2P4-201ENST00000421750 331 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 RPS12P17-201ENST00000438591 377 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC016696.1-201ENST00000446949 318 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 TPT1P13-201ENST00000449760 499 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 SSXP4-201ENST00000451349 245 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC005229.2-201ENST00000456995 399 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC008958.1-201ENST00000511047 682 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 NDUFB4P9-201ENST00000511646 388 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AC008521.1-201ENST00000587471 187 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 uc_338.26-201ENST00000612659 160 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AL596275.2-208ENST00000641192 594 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AL596275.2-204ENST00000641628 552 ntBASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC7.87□□□□□ -1.15
TRIM35Q9UPQ4 MARK2P4-201ENST00000503381 2380 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 MELK-211ENST00000545008 2236 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 SNORA70H-201ENST00000383910 135 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 SNORA70J-201ENST00000384182 135 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 Y_RNA.580-201ENST00000391004 95 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 EEF1A1P29-201ENST00000416082 1096 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 RBBP4P6-201ENST00000508098 202 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 IGKV2-36-201ENST00000519999 223 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 AMZ2P1-203ENST00000565833 850 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 Z75746.1-201ENST00000440243 2080 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 IMMTP1-201ENST00000435590 2219 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 HSPD1P8-201ENST00000400121 1658 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 AL139805.2-201ENST00000455305 2433 ntBASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
TRIM35Q9UPQ4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 RNA5SP258-201ENST00000362750 119 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 Y_RNA.439-201ENST00000384119 94 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 Y_RNA.441-201ENST00000384123 112 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 HMGN1P24-201ENST00000412282 298 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 OR6D1P-201ENST00000436165 939 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 RPL23AP15-201ENST00000450202 459 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC144530.1-201ENST00000452862 555 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 HLA-DPA3-207ENST00000454398 229 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 RPL23AP40-201ENST00000487630 390 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 B4GALNT2P1-201ENST00000508857 307 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 SNORD116-28-201ENST00000516123 91 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC233702.2-202ENST00000562547 291 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC012443.1-201ENST00000605605 231 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC023813.4-201ENST00000607580 580 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AC245014.3-201ENST00000618589 347 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AL161637.1-201ENST00000622380 412 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 NAMPTP1-201ENST00000440465 2514 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 AL161756.3-201ENST00000641216 2071 ntBASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
TRIM35Q9UPQ4 GABPAP-201ENST00000419271 1356 ntBASIC7.84□□□□□ -1.15
TRIM35Q9UPQ4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms