Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 EXOC5P1-201ENST00000510543 1969 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 RNVU1-3-201ENST00000364313 161 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 HMGB3P12-201ENST00000438745 556 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 RN7SKP31-201ENST00000516354 278 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AC022069.1-201ENST00000582910 658 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AC006254.3-201ENST00000603353 884 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN11AQ9UI33 AC009487.4-201ENST00000624969 3585 ntBASIC3.24□□□□□ -1.89
SCN11AQ9UI33 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 USP9YP20-201ENST00000419224 558 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AP002770.2-201ENST00000543613 532 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 MIR3186-201ENST00000577404 85 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AC025811.1-201ENST00000604312 472 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AL354950.1-201ENST00000614150 568 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 RPL9P7-201ENST00000330965 580 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 RNU6-178P-201ENST00000384631 104 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AL031736.2-201ENST00000426573 787 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AL356320.1-201ENST00000429616 163 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 RN7SKP24-201ENST00000515888 284 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AC044913.1-201ENST00000557200 430 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 Z99129.2-201ENST00000619967 314 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 AC103798.2-201ENST00000624292 632 ntBASIC3.23□□□□□ -1.89
SCN11AQ9UI33 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN11AQ9UI33 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SCN11AQ9UI33 AL021368.2-201ENST00000606125 5352 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN11AQ9UI33 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN11AQ9UI33 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCN11AQ9UI33 SNORA62.2-201ENST00000364672 152 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SCN11AQ9UI33 RNA5SP210-201ENST00000391034 120 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 PTP4A1P5-201ENST00000420305 455 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 AC234781.5-201ENST00000508429 271 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 MIR5092-201ENST00000583139 88 ntBASIC3.22□□□□□ -1.89
SCN11AQ9UI33 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
SCN11AQ9UI33 AC006020.1-201ENST00000420179 1854 ntBASIC3.21□□□□□ -1.89
SCN11AQ9UI33 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 RPS20P25-201ENST00000412447 352 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 HMGN1P5-201ENST00000448591 263 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 AP000893.1-201ENST00000474462 794 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 AC135999.1-201ENST00000478962 479 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 AC099063.3-201ENST00000642066 185 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 AC069528.2-201ENST00000624849 1991 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.21□□□□□ -1.9
SCN11AQ9UI33 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.21□□□□□ -1.9
SCN11AQ9UI33 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 RPL36AP51-201ENST00000487216 318 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AC008716.1-201ENST00000511084 513 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AP000867.2-201ENST00000532468 320 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 TRAV37-201ENST00000553906 342 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AL356274.1-201ENST00000617064 410 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.2□□□□□ -1.9
SCN11AQ9UI33 RNU2-6P-201ENST00000411404 190 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AL137014.1-201ENST00000420490 1226 ntBASIC3.2□□□□□ -1.9
SCN11AQ9UI33 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms