Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 AC106785.1-201ENST00000565935 262 ntBASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AC126365.2-201ENST00000580630 379 ntBASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AC090330.1-201ENST00000588646 764 ntBASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 XIAPP1-201ENST00000603162 600 ntBASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AL592148.2-201ENST00000612210 372 ntBASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AC111188.2-201ENST00000529697 1387 ntBASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CHRNA9Q9UGM1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC090740.1-201ENST00000623193 2262 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 SGO1P2-201ENST00000429458 1589 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 RNU1-64P-201ENST00000365443 163 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 U8.11-201ENST00000384699 133 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 U8.12-201ENST00000384701 133 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 RPS3AP26-201ENST00000398259 784 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 RN7SKP159-201ENST00000410657 292 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 BOLA3P4-201ENST00000418151 400 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC092634.6-201ENST00000418558 192 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC006989.1-201ENST00000427212 131 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL445669.2-201ENST00000454425 421 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 U8.18-201ENST00000459285 133 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 HMGB1P25-201ENST00000468402 607 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 RPS27AP1-201ENST00000475545 471 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 RPS3AP50-201ENST00000487064 803 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 DYNLL1P6-201ENST00000503440 264 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 HMGN1P11-201ENST00000508668 303 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC010625.1-201ENST00000511296 403 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 SNORA31.8-201ENST00000516327 108 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC044913.1-201ENST00000557200 430 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AC093227.2-201ENST00000589357 285 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL391497.1-201ENST00000608671 547 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL110115.1-201ENST00000614396 364 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL732618.1-201ENST00000623251 301 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 AL732372.2-225ENST00000642124 456 ntBASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CHRNA9Q9UGM1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 RNA5SP42-201ENST00000364278 115 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 SNORD51-201ENST00000384320 80 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 RNU6-878P-201ENST00000384578 110 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 RNU6-1300P-201ENST00000391046 108 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 RPL7P60-201ENST00000397636 735 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 CYCSP19-201ENST00000411715 316 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AC127526.1-201ENST00000417526 366 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 MTCO3P1-205ENST00000422088 832 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 SNRPEP4-201ENST00000435815 279 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AL645931.1-201ENST00000439737 410 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AC096751.1-202ENST00000502691 1067 ntBASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.3□□□□□ -1.88
CHRNA9Q9UGM1 AC007991.1-201ENST00000522680 631 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms