Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 POLR2KP1-201ENST00000553226 168 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC006539.2-201ENST00000601729 572 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 SRGNP1-201ENST00000603392 451 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 AC007566.2-201ENST00000603642 413 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 XPOTP1-201ENST00000443317 2398 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.79□□□□□ -1.96
VPS29Q9UBQ0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 RNU6-851P-201ENST00000384565 107 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 SDCBPP3-201ENST00000419629 891 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 ELOCP13-201ENST00000443934 329 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 BX510359.1-201ENST00000456973 237 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 PCNAP1-201ENST00000505363 709 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 RN7SKP282-201ENST00000516824 299 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AC008562.1-201ENST00000521763 330 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 COX6B1P6-201ENST00000522347 255 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 H3F3AP1-201ENST00000559984 334 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AC090751.1-201ENST00000566966 267 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AC053481.3-201ENST00000577881 843 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 MAGOH2P-202ENST00000584384 429 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AL159169.3-201ENST00000608871 561 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AL590282.1-201ENST00000610379 1136 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AL590240.3-201ENST00000621416 943 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AC091953.5-201ENST00000622919 233 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 AC093010.3-201ENST00000570269 15214 ntBASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS29Q9UBQ0 PABPC1P7-201ENST00000413177 1513 ntBASIC2.78□□□□□ -1.97
VPS29Q9UBQ0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.78□□□□□ -1.97
VPS29Q9UBQ0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 ZNF37BP-203ENST00000452306 1352 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RPL9P7-201ENST00000330965 580 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RNA5SP374-201ENST00000362939 125 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RNU6-1181P-201ENST00000384191 106 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 MIR512-1-201ENST00000384913 84 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AL031121.1-201ENST00000406553 254 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RPL5P18-201ENST00000406671 891 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 MIR1250-201ENST00000408098 113 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC109780.2-201ENST00000413467 845 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 HSPE1P1-201ENST00000421494 318 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AL389915.1-201ENST00000422463 466 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC022018.1-201ENST00000430685 241 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 HMGB1P5-202ENST00000451497 985 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC034236.1-201ENST00000469891 373 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC104689.1-201ENST00000473356 768 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AL024509.2-201ENST00000493462 493 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC004923.2-201ENST00000529649 369 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 IGHV3-29-201ENST00000604817 344 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 CYCSP41-201ENST00000616920 296 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS29Q9UBQ0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC000403.1-201ENST00000613696 3585 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 MIR422A-201ENST00000362286 90 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 MIR23B-201ENST00000384832 97 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AL512649.1-201ENST00000428997 581 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 SETP8-201ENST00000435341 628 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 RPL17P49-201ENST00000443728 411 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC112492.1-201ENST00000449607 712 ntBASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS29Q9UBQ0 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms