Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM103A2P-201ENST00000444122 354 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 GDI2P2-201ENST00000445131 608 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 NPM1P49-201ENST00000448027 714 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 RPS24P6-201ENST00000452670 400 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC013356.1-201ENST00000489027 564 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC080014.1-201ENST00000496877 1201 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC023141.12-201ENST00000512399 199 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC117532.1-201ENST00000514638 323 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 DYNLL1P4-201ENST00000549314 266 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC105129.1-201ENST00000560250 297 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC012182.1-201ENST00000570133 895 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 MIR1254-2-201ENST00000579553 63 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AL031176.1-201ENST00000604554 466 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AL590392.1-201ENST00000604960 446 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC135507.1-201ENST00000607214 561 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC092354.2-201ENST00000607786 514 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC073114.1-201ENST00000612027 490 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC068831.8-201ENST00000620171 435 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 AP005019.3-201ENST00000620418 560 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 MIR6830-201ENST00000636015 70 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 AC006971.1-201ENST00000407916 4486 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 MTND4P4-201ENST00000439033 1366 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.26□□□□□ -1.73
LRFN1Q9P244 CCT4P2-201ENST00000233836 1548 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
LRFN1Q9P244 OR56B2P-202ENST00000641377 2453 ntBASIC4.26□□□□□ -1.73
LRFN1Q9P244 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN1Q9P244 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN1Q9P244 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 RNA5SP447-201ENST00000363749 119 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 RN7SKP227-201ENST00000364445 330 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 U3.22-201ENST00000391120 215 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AP000580.1-201ENST00000404439 358 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 MTCO3P12-201ENST00000416718 547 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 SALL4P2-201ENST00000423288 2910 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 BX119904.4-201ENST00000424402 301 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 RPEP3-201ENST00000425462 676 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN1Q9P244 VN1R108P-201ENST00000431580 830 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 COX6CP2-201ENST00000444980 225 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC005921.1-201ENST00000510589 286 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 SNORA31.20-201ENST00000517111 133 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC134698.5-201ENST00000519444 336 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC087481.2-201ENST00000565492 330 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC084783.1-201ENST00000565846 910 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC006254.3-201ENST00000603353 884 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC011451.2-201ENST00000604303 598 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AL356218.2-201ENST00000605264 187 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC091965.4-201ENST00000607691 587 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AL158063.1-201ENST00000615349 536 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 MLECP1-201ENST00000615893 709 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC015914.2-201ENST00000618167 288 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC139792.2-201ENST00000624218 587 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AL356121.2-201ENST00000624715 780 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC093591.3-201ENST00000634516 308 ntBASIC4.25□□□□□ -1.73
LRFN1Q9P244 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.25□□□□□ -1.73
LRFN1Q9P244 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LRFN1Q9P244 AC004925.1-201ENST00000624256 2706 ntBASIC4.24□□□□□ -1.73
LRFN1Q9P244 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN1Q9P244 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.24□□□□□ -1.73
LRFN1Q9P244 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN1Q9P244 AC021755.1-201ENST00000559747 1447 ntBASIC4.24□□□□□ -1.73
LRFN1Q9P244 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN1Q9P244 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LRFN1Q9P244 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.24□□□□□ -1.73
LRFN1Q9P244 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.24□□□□□ -1.73
LRFN1Q9P244 Y_RNA.126-201ENST00000363382 111 ntBASIC4.24□□□□□ -1.73
LRFN1Q9P244 RNU5F-7P-201ENST00000363696 115 ntBASIC4.24□□□□□ -1.73
LRFN1Q9P244 RNA5SP235-201ENST00000365411 114 ntBASIC4.24□□□□□ -1.73
LRFN1Q9P244 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
LRFN1Q9P244 ARL4AP5-201ENST00000404372 599 ntBASIC4.24□□□□□ -1.73
LRFN1Q9P244 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms