Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CNTN3Q9P232 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC091912.1-201ENST00000511351 248 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AP005435.4-201ENST00000529514 284 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AL163153.1-201ENST00000554223 283 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 MIR4775-201ENST00000581168 75 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 RN7SL356P-201ENST00000582228 248 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC013244.1-201ENST00000604279 193 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 AL121992.2-201ENST00000606262 256 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 OR55B1P-203ENST00000641518 2602 ntBASIC5.84□□□□□ -1.47
CNTN3Q9P232 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.84□□□□□ -1.47
CNTN3Q9P232 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
CNTN3Q9P232 AC104964.3-201ENST00000606115 2860 ntBASIC5.84□□□□□ -1.48
CNTN3Q9P232 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 Y_RNA.339-201ENST00000365325 102 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 MIR223-201ENST00000385204 110 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 RNA5SP345-201ENST00000410646 108 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 HMGN1P24-201ENST00000412282 298 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AL139148.1-201ENST00000427122 680 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC107399.1-201ENST00000451226 265 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC104308.1-201ENST00000454621 333 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 RN7SL197P-201ENST00000466981 299 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 RPL30P11-201ENST00000495304 339 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC072052.1-201ENST00000496556 306 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC021146.2-201ENST00000504736 556 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC116562.3-201ENST00000506136 177 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 RNU2-10P-201ENST00000516375 211 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC027308.1-201ENST00000517993 110 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC068587.5-201ENST00000528506 175 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC024224.1-201ENST00000538284 609 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 MIR4424-201ENST00000585257 86 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC124303.1-201ENST00000605703 360 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AL139124.1-201ENST00000609123 421 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC103710.2-201ENST00000609912 942 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC007546.1-201ENST00000619452 559 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 MIR6719-201ENST00000622428 87 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC099494.2-201ENST00000623371 978 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC074101.1-201ENST00000637861 241 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 C4BPAP1-201ENST00000415474 1893 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 SAMMSON-213ENST00000641336 1521 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 AP002512.4-202ENST00000641599 4530 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CNTN3Q9P232 AC012618.3-205ENST00000637896 1496 ntBASIC5.83□□□□□ -1.48
CNTN3Q9P232 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CNTN3Q9P232 DHX40P1-201ENST00000588725 1412 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CNTN3Q9P232 ELL2P4-201ENST00000446870 1376 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 THAP12P4-201ENST00000528321 2266 ntBASIC5.82□□□□□ -1.48
CNTN3Q9P232 AC002525.1-201ENST00000624392 1622 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms