Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC069209.1-201ENST00000619282 651 ntBASIC3.55□□□□□ -1.84
NDE1Q9NXR1 AP000676.3-201ENST00000623299 569 ntBASIC3.55□□□□□ -1.84
NDE1Q9NXR1 AC007490.1-201ENST00000624321 703 ntBASIC3.55□□□□□ -1.84
NDE1Q9NXR1 MIR4278-201ENST00000636094 69 ntBASIC3.55□□□□□ -1.84
NDE1Q9NXR1 MIR1322-201ENST00000638013 71 ntBASIC3.55□□□□□ -1.84
NDE1Q9NXR1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDE1Q9NXR1 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDE1Q9NXR1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDE1Q9NXR1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NDE1Q9NXR1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNA5SP42-201ENST00000364278 115 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 SNORA62-201ENST00000365493 153 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU6-805P-201ENST00000365643 106 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU6-157P-201ENST00000383957 107 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU6-1293P-201ENST00000384077 107 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RPP40P1-201ENST00000426762 456 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RPS6P15-201ENST00000431996 751 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RPS3AP46-201ENST00000448352 682 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC104978.1-201ENST00000449387 391 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 ART2BP-201ENST00000453501 499 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RPS27P29-201ENST00000463110 252 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AL672167.3-201ENST00000465951 960 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC025674.1-201ENST00000507074 324 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC005351.1-201ENST00000511152 786 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 PHBP14-201ENST00000512887 367 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU2-27P-201ENST00000516185 142 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU6-1225P-201ENST00000516336 65 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RN7SKP289-201ENST00000517244 295 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC005832.3-201ENST00000537929 631 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 DUXAP1-201ENST00000556632 463 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 TRAV15-201ENST00000556680 249 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 ZNF192P1-203ENST00000565888 810 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC138915.2-201ENST00000569776 97 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 MIR4715-201ENST00000584117 79 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 IPO5P1-202ENST00000600039 287 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 BNIP3P26-201ENST00000600827 554 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 RNU6-156P-201ENST00000621869 107 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC073530.2-201ENST00000623987 261 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AC068620.4-201ENST00000636730 1182 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 AP000776.1-201ENST00000530032 1663 ntBASIC3.54□□□□□ -1.84
NDE1Q9NXR1 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NDE1Q9NXR1 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RNU6-1066P-201ENST00000363573 105 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RNA5SP509-201ENST00000364577 119 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 SNORA73.2-201ENST00000364946 201 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RSL24D1P4-201ENST00000400938 484 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RAP1BP1-201ENST00000412709 553 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AL139421.1-201ENST00000423010 169 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 GLRXP1-201ENST00000423261 334 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 COX6CP15-201ENST00000426313 211 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 Z74696.2-201ENST00000436514 498 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.53□□□□□ -1.84
NDE1Q9NXR1 Z99714.1-201ENST00000450463 807 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RPL12P26-201ENST00000452430 487 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 ANKRD26P4-201ENST00000455755 950 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 RPS20P32-201ENST00000456044 356 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 ATG12P2-201ENST00000456830 416 ntBASIC3.53□□□□□ -1.84
NDE1Q9NXR1 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms