Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 Y_RNA.364-201ENST00000365532 101 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 TOMM22P1-201ENST00000418578 312 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 EIF4EP1-201ENST00000422311 642 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC099799.1-201ENST00000439809 192 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC079781.1-201ENST00000441505 394 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC013429.1-201ENST00000456604 422 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 RN7SL727P-201ENST00000482164 296 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC018437.1-201ENST00000492214 406 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 GNAI2P1-201ENST00000541815 315 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 FKBP1BP1-201ENST00000553366 325 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC004817.1-201ENST00000553621 721 ntTSL 4 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC007494.1-201ENST00000562293 760 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 TUBAP4-201ENST00000569261 416 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 RN7SL667P-201ENST00000582817 298 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC053481.4-201ENST00000583164 216 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AP001554.1-201ENST00000604533 376 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 PSMD5-AS1-215ENST00000640622 205 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC093278.2-201ENST00000564956 2485 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AL121839.2-201ENST00000565058 6943 ntBASIC7.79□□□□□ -1.16
RTN4Q9NQC3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RTN4Q9NQC3 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 MTND5P30-201ENST00000452896 1731 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC025470.1-201ENST00000510053 2032 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 SNORA73B-201ENST00000363217 204 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 SNORA70.8-201ENST00000384231 136 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 RNU6-463P-201ENST00000384340 107 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 MIR607-201ENST00000385241 96 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 RNA5SP297-201ENST00000391029 113 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AL096701.2-201ENST00000416920 238 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 RPSAP59-201ENST00000421048 890 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AL163193.1-201ENST00000444895 788 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC005077.1-201ENST00000449226 375 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC093166.4-201ENST00000457867 318 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 FAM74A1-201ENST00000465257 623 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC008571.1-201ENST00000467232 300 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC103987.1-201ENST00000473394 348 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AL135752.1-201ENST00000479477 471 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 RN7SL608P-201ENST00000492377 279 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 RN7SL516P-201ENST00000496127 297 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 ACA59.1-201ENST00000515966 143 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 EEF1B2P1-201ENST00000567221 672 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC010653.1-201ENST00000571108 881 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC087575.1-201ENST00000585087 229 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AC068790.4-201ENST00000602474 263 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 FAM74A6-203ENST00000615956 481 ntBASIC7.78□□□□□ -1.16
RTN4Q9NQC3 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RTN4Q9NQC3 DNM1P47-203ENST00000571780 12667 ntBASIC7.77□□□□□ -1.16
RTN4Q9NQC3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTN4Q9NQC3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTN4Q9NQC3 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RTN4Q9NQC3 AC100778.3-201ENST00000580060 1750 ntBASIC7.77□□□□□ -1.17
RTN4Q9NQC3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms