Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RPL7P52-201ENST00000449200 742 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 BX322784.1-201ENST00000455793 1077 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 snoU13.8-201ENST00000458890 104 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 RPS4XP10-201ENST00000465034 731 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 RPL31P13-201ENST00000484151 370 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC111000.2-201ENST00000507775 550 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC008958.1-201ENST00000511047 682 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 OR7K1P-201ENST00000546439 926 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 SETP7-201ENST00000552169 453 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL356218.2-201ENST00000605264 187 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL390208.1-201ENST00000605885 644 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC024560.3-201ENST00000608482 349 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC018816.2-201ENST00000621460 353 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC009039.2-201ENST00000624524 529 ntBASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.02□□□□□ -1.77
BRF2Q9HAW0 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AP001350.1-201ENST00000601906 1524 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AL161781.1-201ENST00000354277 403 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RNU6-553P-201ENST00000364047 96 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RNU6-289P-201ENST00000364093 107 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 MIR3074-201ENST00000384885 81 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RNU6-952P-201ENST00000391164 108 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 UBE2FP3-201ENST00000436366 524 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC069285.2-201ENST00000440210 275 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 NPM1P49-201ENST00000448027 714 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 NDUFA12P1-201ENST00000455914 406 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RNA5SP246-201ENST00000458909 119 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RPL31P50-201ENST00000471002 296 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RPL30P6-201ENST00000475925 342 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC023424.2-201ENST00000493479 777 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 LTV1P1-201ENST00000510683 1237 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 RNA5SP519-201ENST00000516480 119 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC008802.1-201ENST00000519121 791 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC018630.1-201ENST00000541376 925 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC007424.1-203ENST00000554613 687 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC072039.2-201ENST00000608883 439 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AC008443.7-201ENST00000622195 246 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 AP000346.3-201ENST00000622821 210 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 MIR3974-201ENST00000637126 96 ntBASIC4.01□□□□□ -1.77
BRF2Q9HAW0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BRF2Q9HAW0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
BRF2Q9HAW0 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
BRF2Q9HAW0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4□□□□□ -1.77
BRF2Q9HAW0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4□□□□□ -1.77
BRF2Q9HAW0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BRF2Q9HAW0 SNORD74.4-201ENST00000364129 80 ntBASIC4□□□□□ -1.77
BRF2Q9HAW0 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BRF2Q9HAW0 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4□□□□□ -1.77
BRF2Q9HAW0 AC011933.1-201ENST00000413334 321 ntBASIC4□□□□□ -1.77
BRF2Q9HAW0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4□□□□□ -1.77
BRF2Q9HAW0 HMGB1P11-201ENST00000413899 637 ntBASIC4□□□□□ -1.77
BRF2Q9HAW0 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4□□□□□ -1.77
BRF2Q9HAW0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4□□□□□ -1.77
BRF2Q9HAW0 OR1AA1P-201ENST00000419597 916 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms