Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 ST13P14-201ENST00000474095 734 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC023050.1-201ENST00000498198 304 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC124293.1-201ENST00000530034 493 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 CYB5AP5-201ENST00000549779 389 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AP000919.1-202ENST00000581139 1264 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC012493.2-201ENST00000595083 291 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 VN1R88P-201ENST00000596787 292 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC018926.3-201ENST00000618841 406 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC022079.2-201ENST00000619739 566 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC026422.1-201ENST00000623961 452 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AP003476.1-201ENST00000623984 516 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 AC009452.1-201ENST00000640823 606 ntBASIC3.71□□□□□ -1.82
RNF41Q9H4P4 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF41Q9H4P4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 U3.11-201ENST00000364476 212 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 Y_RNA.333-201ENST00000365274 102 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 MIR620-201ENST00000385232 95 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 MCTS2P-201ENST00000394552 546 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 GSTA8P-201ENST00000404253 637 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RNU6-77P-201ENST00000410554 91 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC006960.1-201ENST00000419980 153 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 PTP4A1P5-201ENST00000420305 455 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AL354692.1-201ENST00000423044 315 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RPL30P3-201ENST00000424262 333 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 UBE2V1P5-201ENST00000440070 405 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RPS3AP12-201ENST00000443616 753 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RN7SL330P-201ENST00000469709 307 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RN7SL442P-201ENST00000473804 320 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC104982.1-201ENST00000478775 574 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 SUMO2P5-201ENST00000506790 245 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 MTATP6P9-201ENST00000515039 680 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RNU1-143P-201ENST00000516296 146 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 IGKV2-23-201ENST00000518729 323 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AP001207.2-201ENST00000519490 539 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 MTCO1P40-201ENST00000574371 625 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 UBL5P2-201ENST00000583788 219 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 PRELID3BP8-201ENST00000604148 295 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC124312.4-201ENST00000605533 310 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 U1.23-201ENST00000610293 146 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC100793.4-201ENST00000613683 429 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 RNU1-68P-201ENST00000615382 146 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 MIR8057-201ENST00000620957 69 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 U1.39-201ENST00000621562 146 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 MIR7153-201ENST00000637758 57 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 BX649567.1-201ENST00000642071 1134 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC025263.3-201ENST00000622965 1396 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 AC090229.1-201ENST00000590983 1609 ntBASIC3.7□□□□□ -1.82
RNF41Q9H4P4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF41Q9H4P4 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 MIR122-201ENST00000385044 85 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RPL7P25-201ENST00000404151 721 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RPS7P13-201ENST00000413955 498 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 RPS12P23-201ENST00000419579 400 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AL009174.1-201ENST00000426577 416 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 FTH1P6-201ENST00000430768 320 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 BX248409.1-201ENST00000455497 255 ntBASIC3.69□□□□□ -1.82
RNF41Q9H4P4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.69□□□□□ -1.82
RNF41Q9H4P4 AC096992.1-201ENST00000459808 709 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms