Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RNU6-821P-201ENST00000390995 107 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 RNU6-932P-201ENST00000391108 106 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 BX842559.1-201ENST00000419615 532 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 FNDC3CP-201ENST00000420795 1155 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 MTCO2P1-201ENST00000424648 477 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 RPL12P26-201ENST00000452430 487 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 RPS27AP1-201ENST00000475545 471 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC008628.1-201ENST00000508663 265 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC048346.1-201ENST00000510247 144 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 SNORD39.3-201ENST00000584451 71 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 MIR3922-201ENST00000585192 84 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 XIAPP1-201ENST00000603162 600 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AL357559.1-201ENST00000622228 274 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC110801.1-201ENST00000623590 212 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 SNORA50A-202ENST00000629536 136 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 AC130650.2-201ENST00000618736 2403 ntBASIC3.49□□□□□ -1.85
POLR1EQ9GZS1 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 OR1L1-202ENST00000373686 1083 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC234772.1-201ENST00000377927 937 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 TAF13P2-201ENST00000416876 286 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 UBE2D3P3-201ENST00000426992 425 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AP000907.1-201ENST00000428428 510 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AL050321.1-201ENST00000432363 400 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 ARL4AP4-201ENST00000434170 518 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 SSXP4-201ENST00000451349 245 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 RNU7-140P-201ENST00000459546 60 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC012181.1-201ENST00000479895 423 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 PCBP2P3-201ENST00000509726 843 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 FCF1P8-201ENST00000510322 597 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 RNU1-61P-201ENST00000516107 151 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC107934.2-201ENST00000518653 310 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 ZNF705CP-201ENST00000530515 889 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 TGIF1P1-201ENST00000558095 802 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AP001029.3-201ENST00000588063 596 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC002487.1-201ENST00000604565 994 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC006329.2-201ENST00000611491 394 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 RNVU1-4-201ENST00000612985 164 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 AC111188.2-201ENST00000529697 1387 ntBASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.48□□□□□ -1.85
POLR1EQ9GZS1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC005183.1-201ENST00000603687 1979 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 RNU6-619P-201ENST00000365146 108 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 RPL30P2-201ENST00000414021 291 ntBASIC3.47□□□□□ -1.85
POLR1EQ9GZS1 AC245052.5-201ENST00000416320 649 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms