Protein–RNA interactions for Protein: Q9BYQ3

KRTAP9-3, Keratin-associated protein 9-3, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-3Q9BYQ3 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 TRERF1-205ENST00000541110 7646 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SETD7-207ENST00000608958 5281 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 DOCK8-209ENST00000469391 6386 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC018992.1-201ENST00000523778 2149 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC105046.1-201ENST00000566457 4997 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 NBAS-201ENST00000281513 7281 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF611-219ENST00000602162 3299 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNA5SP321-201ENST00000362722 111 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-78P-201ENST00000362897 107 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNY3P2-201ENST00000362918 102 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-409P-201ENST00000384114 104 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 Y_RNA.545-201ENST00000384652 105 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNA5SP474-201ENST00000391234 90 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 MTND4LP19-201ENST00000403051 166 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORA77.2-201ENST00000408571 112 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL035422.1-201ENST00000414193 397 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC108479.1-201ENST00000431142 427 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 CYCSP6-201ENST00000434498 302 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AF228730.3-201ENST00000436691 102 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC090804.1-201ENST00000448870 490 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPL23AP24-201ENST00000458203 385 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPS4XP2-201ENST00000458402 793 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC107626.1-201ENST00000471084 183 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 CBX1-205ENST00000495350 550 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC146944.3-201ENST00000509969 371 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORA70.11-201ENST00000515987 138 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORA70.13-201ENST00000516116 138 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNU6-927P-201ENST00000516199 100 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SNORA18.4-201ENST00000516440 124 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RNA5SP441-201ENST00000516809 88 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC120036.3-201ENST00000517826 292 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 IGLVIV-53-201ENST00000520107 367 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 DEFB131E-201ENST00000532329 154 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 IPO5P1-202ENST00000600039 287 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AL596275.2-208ENST00000641192 594 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC127459.1-201ENST00000563129 2768 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 THSD7B-201ENST00000272643 5939 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 INTS7-201ENST00000366992 3380 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC139426.3-201ENST00000605648 2059 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 NSA2-205ENST00000610426 4594 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 DHX8-202ENST00000540306 3809 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 OR7E122P-202ENST00000641144 6171 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 AC007938.1-201ENST00000562524 2902 ntBASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
KRTAP9-3Q9BYQ3 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
KRTAP9-3Q9BYQ3 FLNB-212ENST00000490882 8079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms