Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AL451074.5-201ENST00000415894 435 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 VDAC1P3-201ENST00000434069 851 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AL590103.1-201ENST00000434488 307 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AC108210.2-201ENST00000503681 201 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 RN7SKP244-201ENST00000516513 307 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AL392112.1-201ENST00000605115 829 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AL354950.1-201ENST00000614150 568 ntBASIC3.91□□□□□ -1.78
SCAPERQ9BY12 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SCAPERQ9BY12 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 OR2B8P-201ENST00000432841 938 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 HMGN2P3-201ENST00000433603 273 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 HMGN2P5-201ENST00000436882 273 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 HMGB1P18-201ENST00000438801 619 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AL592437.1-201ENST00000443781 492 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 HIGD1AP2-201ENST00000446367 280 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 RPS4XP6-201ENST00000477670 797 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AC092436.1-201ENST00000506450 503 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AC009063.1-201ENST00000563342 702 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AC055876.1-202ENST00000567053 138 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AP002967.1-201ENST00000624203 539 ntBASIC3.9□□□□□ -1.78
SCAPERQ9BY12 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.9□□□□□ -1.78
SCAPERQ9BY12 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCAPERQ9BY12 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCAPERQ9BY12 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SCAPERQ9BY12 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.9□□□□□ -1.79
SCAPERQ9BY12 MIR181A2-201ENST00000384863 110 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 MTCO1P39-201ENST00000426148 480 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AC244505.4-201ENST00000434905 287 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 SSXP5-201ENST00000443473 287 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 CEACAMP4-201ENST00000457676 421 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AP004217.1-201ENST00000480579 346 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AC005921.1-201ENST00000510589 286 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 ATP5F1P5-201ENST00000526403 760 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 HIGD1AP10-201ENST00000527837 282 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AC005046.1-201ENST00000608515 625 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 U6.98-201ENST00000637157 84 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AC109315.1-201ENST00000584143 1347 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 XPOTP1-201ENST00000443317 2398 ntBASIC3.89□□□□□ -1.79
SCAPERQ9BY12 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.89□□□□□ -1.79
SCAPERQ9BY12 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 RNU6-482P-201ENST00000391068 107 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AC093151.1-201ENST00000427711 313 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AL356320.1-201ENST00000429616 163 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 RN7SL636P-201ENST00000497504 294 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AC007423.1-201ENST00000605009 627 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AC069234.5-201ENST00000611056 416 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 LRRC77P-213ENST00000637727 880 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 AC099063.3-201ENST00000642066 185 ntBASIC3.88□□□□□ -1.79
SCAPERQ9BY12 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SCAPERQ9BY12 GSTA12P-201ENST00000402398 508 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 SEC11B-201ENST00000518383 499 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 MIR3605-201ENST00000583214 100 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AC025811.1-201ENST00000604312 472 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AC079228.1-201ENST00000624774 1049 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 SNORA51.4-201ENST00000364993 124 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AL079342.1-201ENST00000401460 267 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AL353705.4-201ENST00000449661 238 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AC108471.1-201ENST00000513977 287 ntBASIC3.87□□□□□ -1.79
SCAPERQ9BY12 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.87□□□□□ -1.79
SCAPERQ9BY12 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SCAPERQ9BY12 NANOGP5-201ENST00000424456 877 ntBASIC3.86□□□□□ -1.79
SCAPERQ9BY12 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.86□□□□□ -1.79
SCAPERQ9BY12 AC016687.1-201ENST00000482574 353 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms