Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC008264.2-201ENST00000610193 3731 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 SNORA31-201ENST00000362607 130 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 SNORD116.1-201ENST00000365628 92 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 SNORD65.1-201ENST00000390889 71 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 PRRC2CP1-201ENST00000404428 159 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL590084.1-201ENST00000407885 387 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 SDCBPP3-201ENST00000419629 891 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 COX6CP17-201ENST00000421389 185 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC023347.2-201ENST00000433994 462 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC092393.1-201ENST00000439625 742 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL034418.1-201ENST00000448675 860 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 RN7SL594P-201ENST00000470590 287 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 MTND2P14-201ENST00000482139 351 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AP000563.1-201ENST00000490865 758 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 BOLA3P3-201ENST00000505182 232 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 MTCYBP16-201ENST00000509187 1129 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 NIFKP6-201ENST00000598115 845 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AC068313.1-201ENST00000604028 1008 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 RNU1-30P-201ENST00000606575 163 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 AL355493.4-201ENST00000618530 292 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 Z99129.2-201ENST00000619967 314 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 ZNF876P-202ENST00000398732 1485 ntBASIC3.47□□□□□ -1.85
CCDC28BQ9BUN5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.46□□□□□ -1.85
CCDC28BQ9BUN5 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.46□□□□□ -1.85
CCDC28BQ9BUN5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CCDC28BQ9BUN5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AL079305.1-201ENST00000623159 3008 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 SNORD56.3-201ENST00000363507 71 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AL022722.2-201ENST00000402519 180 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AL139098.1-201ENST00000407291 389 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC107081.1-201ENST00000414975 361 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC233981.1-201ENST00000423224 461 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 CETN4P-201ENST00000432407 469 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 OR2B8P-201ENST00000432841 938 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 RAB11AP1-201ENST00000442978 646 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 RPL7P59-201ENST00000447700 943 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 Z99714.1-201ENST00000450463 807 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC007967.1-201ENST00000455422 1159 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 RPL5P24-201ENST00000463742 885 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC108734.3-201ENST00000481241 1165 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 RPL30P11-201ENST00000495304 339 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 FTH1P24-201ENST00000503502 462 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 FTH1P21-201ENST00000512179 511 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 SNORA31.9-201ENST00000516429 84 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 RNU5A-4P-201ENST00000516588 111 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 MIR2276-201ENST00000516886 89 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 RNU6-352P-201ENST00000516908 107 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC087808.1-201ENST00000520501 361 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 CYCSP30-201ENST00000546447 172 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 NBEAP1-201ENST00000554452 979 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AGGF1P6-201ENST00000569213 976 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AC022069.1-201ENST00000582910 658 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 MIR4506-201ENST00000584693 77 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 BNIP3P26-201ENST00000600827 554 ntBASIC3.46□□□□□ -1.86
CCDC28BQ9BUN5 AL390838.2-201ENST00000602394 274 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms