Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 RNU1-143P-201ENST00000516296 146 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 HMGB1P1-201ENST00000522557 636 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 OR8K4P-201ENST00000534608 872 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 SNRPGP1-201ENST00000553864 222 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 RPL21P12-201ENST00000559810 515 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 MIR4504-201ENST00000577413 92 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 AC022069.1-201ENST00000582910 658 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 AL009028.1-201ENST00000604895 802 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 U1.23-201ENST00000610293 146 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 uc_338.1-201ENST00000612113 180 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 RNU1-68P-201ENST00000615382 146 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 U1.39-201ENST00000621562 146 ntBASIC3.08□□□□□ -1.92
COL21A1Q96P44 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
COL21A1Q96P44 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.08□□□□□ -1.92
COL21A1Q96P44 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL21A1Q96P44 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL21A1Q96P44 SNORA51.2-201ENST00000364595 132 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 OR6K3-202ENST00000368146 996 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AL121972.1-201ENST00000402023 252 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 HSPE1P26-201ENST00000405341 275 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 RPL32P35-201ENST00000415214 394 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AL606495.1-201ENST00000422100 813 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 RPF2P1-201ENST00000424137 906 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC005517.2-201ENST00000424673 553 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 RPL23AP69-201ENST00000431134 458 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 BTBD7P2-201ENST00000441962 620 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
COL21A1Q96P44 Z99127.3-201ENST00000448158 395 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 PTGES3P5-201ENST00000455109 434 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 PLGLA-201ENST00000465668 449 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 POU5F1P7-201ENST00000508759 541 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 SCARNA20.6-201ENST00000517251 106 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 HIGD1AP6-201ENST00000521833 279 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC008687.2-201ENST00000597865 520 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC112503.2-201ENST00000609005 552 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC245100.7-201ENST00000609678 442 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC096577.2-201ENST00000611455 153 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 HPVC1-201ENST00000629899 1198 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC025263.3-201ENST00000622965 1396 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
COL21A1Q96P44 MAPK10-362ENST00000641864 4484 ntBASIC3.07□□□□□ -1.92
COL21A1Q96P44 AC093908.1-201ENST00000623125 8092 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL21A1Q96P44 RNU1-70P-201ENST00000362618 164 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 U3.6-201ENST00000363622 211 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL21A1Q96P44 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
COL21A1Q96P44 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 SSXP10-201ENST00000402595 565 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 RNU6-77P-201ENST00000410554 91 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
COL21A1Q96P44 HMGB1P45-201ENST00000435986 653 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AC009969.1-201ENST00000438726 172 ntBASIC3.06□□□□□ -1.92
COL21A1Q96P44 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.06□□□□□ -1.92
COL21A1Q96P44 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms