Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AL442163.2-201ENST00000553912 710 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC007224.1-201ENST00000564410 144 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC037471.2-201ENST00000564941 598 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 MIR5685-201ENST00000579080 79 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AL133393.1-201ENST00000603277 287 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 AP002802.2-201ENST00000605877 235 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC019176.2-201ENST00000611579 315 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 AC104985.3-201ENST00000623479 597 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 AL445984.1-201ENST00000637834 659 ntBASIC2.63□□□□□ -1.99
LINC00477Q96M19 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LINC00477Q96M19 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.63□□□□□ -1.99
LINC00477Q96M19 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00477Q96M19 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00477Q96M19 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 RNU6-50P-201ENST00000362356 103 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 RNU5E-10P-201ENST00000363506 118 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 DEFB109C-201ENST00000382575 264 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 DEFB109B-201ENST00000382656 264 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 Y_RNA.472-201ENST00000384322 102 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 RNU6-925P-201ENST00000384629 104 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 SKINT1L-201ENST00000401057 817 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 RNA5SP129-201ENST00000410276 118 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC093578.1-201ENST00000415219 368 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 SFR1P2-201ENST00000421841 730 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 RPL31P12-201ENST00000422587 358 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 RPL37P1-201ENST00000432310 284 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00477Q96M19 EXOSC3P1-201ENST00000448649 500 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 RPL23AP15-201ENST00000450202 459 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 NECAP1P2-201ENST00000455668 727 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 SNORD105B-201ENST00000458770 79 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 RPL6P9-201ENST00000466502 859 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 SYPL1P1-201ENST00000473622 768 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC091959.2-201ENST00000477363 321 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC068724.1-201ENST00000487100 792 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC008427.1-201ENST00000503102 655 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 UBE2V1P12-201ENST00000503954 474 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LINC00477Q96M19 HMGB1P22-201ENST00000505315 124 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 RNU6-276P-201ENST00000516114 96 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 PARP1P2-201ENST00000556806 195 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC022916.3-201ENST00000592961 742 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 BNIP3P40-201ENST00000596017 556 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 RPAP2P1-201ENST00000603626 1168 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AL160237.3-201ENST00000604114 1013 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AP000238.1-201ENST00000608759 426 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AP005137.2-201ENST00000609238 400 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC093673.2-201ENST00000609674 331 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC006963.1-201ENST00000624003 1052 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 OR4G3P-201ENST00000633500 913 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 AC017104.5-201ENST00000637647 639 ntBASIC2.62□□□□□ -1.99
LINC00477Q96M19 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC00477Q96M19 AL513302.2-201ENST00000562313 1842 ntBASIC2.61□□□□□ -1.99
LINC00477Q96M19 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
LINC00477Q96M19 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC00477Q96M19 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
LINC00477Q96M19 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LINC00477Q96M19 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LINC00477Q96M19 MIR30E-201ENST00000362104 92 ntBASIC2.61□□□□□ -1.99
LINC00477Q96M19 SNORD3H-201ENST00000384486 214 ntBASIC2.61□□□□□ -1.99
LINC00477Q96M19 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LINC00477Q96M19 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.61□□□□□ -1.99
LINC00477Q96M19 PRRC2CP1-201ENST00000404428 159 ntBASIC2.61□□□□□ -1.99
LINC00477Q96M19 AL354719.1-201ENST00000406535 843 ntBASIC2.61□□□□□ -1.99
LINC00477Q96M19 RN7SKP53-201ENST00000411337 315 ntBASIC2.61□□□□□ -1.99
LINC00477Q96M19 RPS7P9-201ENST00000414704 586 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms