Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
IFT43Q96FT9 RPL32P3-201ENST00000359025 275 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 Y_RNA.148-201ENST00000363557 117 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 RNU6-1188P-201ENST00000363795 107 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 RNU6-702P-201ENST00000364982 107 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 RN7SKP229-201ENST00000410465 302 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 RNU6-847P-201ENST00000411115 108 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC069213.2-201ENST00000420238 366 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC093155.2-201ENST00000420734 937 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC079355.1-201ENST00000421770 223 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 REREP1Y-201ENST00000422655 198 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 AF228730.2-201ENST00000438784 848 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 REREP2Y-201ENST00000439103 200 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC064862.4-201ENST00000442180 334 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL031584.1-201ENST00000447169 754 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC243772.1-201ENST00000451620 410 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC006539.1-201ENST00000481419 501 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 FTH1P24-201ENST00000503502 462 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 GAPDHP62-201ENST00000515313 990 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 SNORA70.20-201ENST00000516848 126 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 RNA5SP454-201ENST00000517231 127 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC090136.1-201ENST00000520009 240 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL137161.1-201ENST00000532231 390 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 IMMP1LP2-201ENST00000552954 492 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL359219.2-201ENST00000555184 348 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC010547.6-201ENST00000571789 193 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AL133481.2-203ENST00000607558 139 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC005014.2-201ENST00000607795 599 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC123768.4-201ENST00000616244 701 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
IFT43Q96FT9 AC138965.3-201ENST00000623875 498 ntBASIC5.9□□□□□ -1.46
IFT43Q96FT9 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.9□□□□□ -1.47
IFT43Q96FT9 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
IFT43Q96FT9 AL122126.1-201ENST00000546905 1318 ntBASIC5.9□□□□□ -1.47
IFT43Q96FT9 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
IFT43Q96FT9 MTND5P19-201ENST00000424872 1794 ntBASIC5.9□□□□□ -1.47
IFT43Q96FT9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
IFT43Q96FT9 AL442639.1-201ENST00000625030 1899 ntBASIC5.9□□□□□ -1.47
IFT43Q96FT9 AC010329.2-201ENST00000595195 2737 ntBASIC5.9□□□□□ -1.47
IFT43Q96FT9 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT43Q96FT9 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 RNU6-1252P-201ENST00000363054 104 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 Y_RNA.188-201ENST00000363952 111 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 RNU6-82P-201ENST00000363970 107 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 RPL11P3-201ENST00000395256 523 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 CRIP1P1-201ENST00000427567 185 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 RPL36AP6-201ENST00000435770 321 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC127537.2-201ENST00000439258 465 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL035666.1-201ENST00000446195 348 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC020550.1-201ENST00000447385 163 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 CECR9-201ENST00000453421 199 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 RPL30P15-201ENST00000457129 321 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC079168.1-201ENST00000458741 345 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC022034.3-201ENST00000471393 478 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AL136038.1-201ENST00000497246 351 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 HMGB1P21-201ENST00000502313 581 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 COX7A2P2-201ENST00000505291 250 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC017037.2-201ENST00000513850 890 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 HMGN1P9-201ENST00000515212 298 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 RPS27AP18-201ENST00000515536 459 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 HMGB1P19-201ENST00000517578 577 ntBASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.89□□□□□ -1.47
IFT43Q96FT9 AC005341.1-201ENST00000571086 708 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms