Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.34□□□□□ -2.03
USP9XQ93008 Y_RNA.191-201ENST00000363972 113 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 HMGB1P16-201ENST00000447155 540 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 AP003102.1-201ENST00000525638 661 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 AC007424.1-203ENST00000554613 687 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC2.34□□□□□ -2.03
USP9XQ93008 AC004696.1-201ENST00000614345 607 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 RMST_2.1-201ENST00000617263 136 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 OR1S1-201ENST00000624470 978 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.34□□□□□ -2.03
USP9XQ93008 AC006020.1-201ENST00000420179 1854 ntBASIC2.34□□□□□ -2.03
USP9XQ93008 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
USP9XQ93008 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
USP9XQ93008 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.34□□□□□ -2.04
USP9XQ93008 RPL23AP4-201ENST00000427757 463 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 HMGB3P11-201ENST00000440127 604 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 HMGN1P5-201ENST00000448591 263 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 TRMT112P2-201ENST00000512910 132 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.34□□□□□ -2.04
USP9XQ93008 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
USP9XQ93008 AC005730.3-201ENST00000583067 366 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 AC011494.1-201ENST00000596454 237 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 MIR6515-201ENST00000619843 57 ntBASIC2.34□□□□□ -2.04
USP9XQ93008 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
USP9XQ93008 RNA5SP322-201ENST00000363617 119 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC2.33□□□□□ -2.04
USP9XQ93008 AC093151.1-201ENST00000427711 313 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
USP9XQ93008 AC080013.2-201ENST00000460866 323 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC003982.1-202ENST00000469928 248 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC087385.1-201ENST00000475062 312 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 SRIP1-201ENST00000489235 288 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AP001317.1-201ENST00000531194 960 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.33□□□□□ -2.04
USP9XQ93008 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC091903.1-201ENST00000624322 454 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP9XQ93008 DDX18P3-201ENST00000404856 2007 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP9XQ93008 MTND4P26-201ENST00000415971 1359 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 RNU1-89P-201ENST00000384592 164 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 NPM1P38-201ENST00000403835 865 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.33□□□□□ -2.04
USP9XQ93008 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
USP9XQ93008 AC093663.2-201ENST00000484625 313 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.33□□□□□ -2.04
USP9XQ93008 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.33□□□□□ -2.04
USP9XQ93008 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
USP9XQ93008 AC009039.2-201ENST00000624524 529 ntBASIC2.33□□□□□ -2.04
USP9XQ93008 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.33□□□□□ -2.04
USP9XQ93008 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP9XQ93008 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP9XQ93008 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USP9XQ93008 TAB3P1-202ENST00000452645 1634 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
USP9XQ93008 RN7SKP44-201ENST00000363602 316 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.32□□□□□ -2.04
USP9XQ93008 SETP15-201ENST00000412724 337 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.32□□□□□ -2.04
USP9XQ93008 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
USP9XQ93008 OR4G11P-201ENST00000492842 939 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC2.32□□□□□ -2.04
USP9XQ93008 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.32□□□□□ -2.04
USP9XQ93008 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.32□□□□□ -2.04
USP9XQ93008 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP9XQ93008 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.32□□□□□ -2.04
USP9XQ93008 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP9XQ93008 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP9XQ93008 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.32□□□□□ -2.04
USP9XQ93008 RPS12P2-201ENST00000439728 269 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.32□□□□□ -2.04
USP9XQ93008 RN7SL636P-201ENST00000497504 294 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 AL589994.2-201ENST00000621124 579 ntBASIC2.32□□□□□ -2.04
USP9XQ93008 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
USP9XQ93008 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
USP9XQ93008 RPS3AP9-201ENST00000417027 792 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 RPS20P5-201ENST00000434808 360 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 Z99127.2-201ENST00000441426 334 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC2.31□□□□□ -2.04
USP9XQ93008 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.31□□□□□ -2.04
USP9XQ93008 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.31□□□□□ -2.04
USP9XQ93008 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USP9XQ93008 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.31□□□□□ -2.04
USP9XQ93008 MIR4452-201ENST00000583004 71 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.31□□□□□ -2.04
USP9XQ93008 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.31□□□□□ -2.04
USP9XQ93008 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
USP9XQ93008 MAPK10-362ENST00000641864 4484 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 RNU6-661P-201ENST00000362409 107 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 RPL7P10-201ENST00000417407 739 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
USP9XQ93008 AC234781.5-201ENST00000508429 271 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 AL391813.2-201ENST00000609113 322 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 AL136981.2-201ENST00000617319 734 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC2.31□□□□□ -2.04
USP9XQ93008 AC138627.1-204ENST00000641894 765 ntBASIC2.31□□□□□ -2.04
USP9XQ93008 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.31□□□□□ -2.04
USP9XQ93008 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
USP9XQ93008 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms