Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AC110373.1-201ENST00000505994 3505 ntBASIC5.96□□□□□ -1.46
HPS1Q92902 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HPS1Q92902 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.96□□□□□ -1.46
HPS1Q92902 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 AC024651.2-201ENST00000562480 2098 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 BX322639.1-202ENST00000423987 2213 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 Y_RNA.27-201ENST00000362540 103 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 Y_RNA.273-201ENST00000364703 102 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 Y_RNA.592-201ENST00000410274 109 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 BX842559.1-201ENST00000419615 532 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.95□□□□□ -1.46
HPS1Q92902 FTLP17-201ENST00000432567 525 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 RPL3P11-201ENST00000434028 1146 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 RPL31P11-202ENST00000454082 372 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.95□□□□□ -1.46
HPS1Q92902 GAPDHP53-201ENST00000458397 924 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 RN7SL492P-201ENST00000460700 295 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 RN7SL790P-201ENST00000474043 298 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 RPL21P103-201ENST00000479921 488 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 RNU6-798P-201ENST00000516912 103 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 CDH12P4-201ENST00000517835 295 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 CDH12P3-201ENST00000517935 295 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 CDH12P1-201ENST00000518435 295 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AC018552.1-201ENST00000562099 811 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AC010287.1-201ENST00000566916 357 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AC136932.1-201ENST00000574771 208 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AC008962.1-201ENST00000605729 304 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AL161420.1-201ENST00000619393 264 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 AC073593.1-201ENST00000624500 411 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.95□□□□□ -1.46
HPS1Q92902 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 AC006600.2-201ENST00000624834 2506 ntBASIC5.95□□□□□ -1.46
HPS1Q92902 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
HPS1Q92902 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HPS1Q92902 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.95□□□□□ -1.46
HPS1Q92902 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
HPS1Q92902 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
HPS1Q92902 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HPS1Q92902 AC006484.1-201ENST00000435086 1884 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS1Q92902 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.94□□□□□ -1.46
HPS1Q92902 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HPS1Q92902 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 HAUS6P2-201ENST00000433254 2404 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 AC138393.1-203ENST00000327086 343 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HPS1Q92902 Y_RNA.233-201ENST00000364407 101 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HPS1Q92902 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HPS1Q92902 LDHAP5-201ENST00000394996 622 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS1Q92902 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS1Q92902 RPL24P2-201ENST00000421023 475 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 AC092162.1-201ENST00000432828 434 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 CR769767.1-201ENST00000436337 346 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS1Q92902 TPT1P12-201ENST00000448968 492 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 GOT2P2-201ENST00000450663 1251 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.94□□□□□ -1.46
HPS1Q92902 RPS26P11-201ENST00000463445 348 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 RPS26P6-201ENST00000475156 348 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 RPL23AP8-201ENST00000479812 475 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 RN7SL350P-201ENST00000492591 299 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 MINOS1P4-201ENST00000515470 318 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 RNU6-919P-201ENST00000516731 104 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 IGLC4-201ENST00000517690 248 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS1Q92902 AP005639.1-201ENST00000526939 192 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.94□□□□□ -1.46
HPS1Q92902 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS1Q92902 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.94□□□□□ -1.46
HPS1Q92902 RN7SL126P-201ENST00000616400 299 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 AL512652.1-201ENST00000619006 500 ntBASIC5.94□□□□□ -1.46
HPS1Q92902 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HPS1Q92902 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms