Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU6-1151P-201ENST00000384684 107 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 HSPA8P15-201ENST00000401676 786 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-272P-201ENST00000411028 104 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU2-64P-201ENST00000411315 191 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 GPS2P1-201ENST00000411761 986 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RPL37P10-201ENST00000412884 288 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC074085.1-201ENST00000413598 418 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AL133482.1-201ENST00000415988 498 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RPL23AP4-201ENST00000427757 463 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC092647.2-201ENST00000452998 253 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU7-66P-201ENST00000459469 62 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RPL31P50-201ENST00000471002 296 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC021146.1-201ENST00000511202 716 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 SNORA70.11-201ENST00000515987 138 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 SNORA70.13-201ENST00000516116 138 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 Y_RNA.668-201ENST00000516233 93 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 SCARNA24.1-201ENST00000516465 137 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-1088P-201ENST00000516850 104 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-410P-201ENST00000517006 107 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RN7SKP147-201ENST00000517154 244 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC107934.1-201ENST00000522215 217 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 COX6CP8-201ENST00000522620 226 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AP001922.4-201ENST00000526967 290 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AL359219.2-201ENST00000555184 348 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AP001029.3-201ENST00000588063 596 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 MIR6748-201ENST00000610433 71 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC010632.3-201ENST00000611377 369 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AC007546.1-201ENST00000619452 559 ntBASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.55□□□□□ -1.52
SHKBP1Q8TBC3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC073136.1-201ENST00000449426 2884 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-1115P-201ENST00000362490 106 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-38P-201ENST00000384085 107 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 SNORD56.6-201ENST00000384569 71 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 Y_RNA.530-201ENST00000384587 101 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 Y_RNA.556-201ENST00000384677 113 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RN7SKP216-201ENST00000411050 312 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AL772161.1-201ENST00000439130 476 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RPL30P15-201ENST00000457129 321 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RNU6-333P-201ENST00000459117 107 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MIR2053-201ENST00000459295 91 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC006512.1-201ENST00000468816 291 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 RPS15AP17-201ENST00000470598 390 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 TMEM251P1-201ENST00000503717 318 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC004062.1-201ENST00000509926 645 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC004980.4-201ENST00000513375 203 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 SNORA25.10-201ENST00000515926 124 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 CDH12P4-201ENST00000517835 295 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 CDH12P3-201ENST00000517935 295 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 CDH12P1-201ENST00000518435 295 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 MTCO3P23-201ENST00000561363 289 ntBASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.54□□□□□ -1.52
SHKBP1Q8TBC3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms